Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B1367 |
Symbol | kdsA |
ID | 6795529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | + |
Start bp | 1331563 |
End bp | 1332417 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642775619 |
Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
Protein accession | YP_002146257 |
Protein GI | 197248417 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.038326 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAAA AAGTGGTTAA CATTGGCGAC ATTAAGGTGG CAAATGACCT GCCGTTTGTG CTGTTTGGCG GTATGAACGT GCTGGAGTCA CGCGATCTGG CAATGCGCAT TTGTGAGCAC TACGTAACCG TTACCCAGAA GCTGGGTATT CCTTACGTGT TCAAGGCCTC TTTTGATAAA GCCAACCGTT CCTCTATTCA CTCTTACCGT GGGCCGGGTC TGGAAGAAGG GATGAAAATC TTCCAGGAAC TCAAGCAGAC ATTTGGCGTA AAAGTGATCA CTGACGTCCA TGAAGCCAGC CAGGCGCAGC CTGTGGCTGA TGTGGTTGAC GTGATTCAGC TCCCGGCGTT TCTGGCGCGC CAGACCGACC TGGTGGAAGC GATGGCGAAA ACCGGCGCTG TGATTAACGT GAAAAAGCCG CAGTTCGTAA GCCCGGGTCA GATGGGCAAT ATCGTGGATA AGTTCCATGA GGGCGGTAAC GATAAGGTGA TTCTGTGCGA CCGCGGCGCG AACTTCGGTT ATGACAACCT GGTGGTGGAT ATGCTGGGCT TTAGCGTGAT GAAAAAGGTC TCCGGCAACT CGCCGGTGAT TTTCGACGTT ACCCATGCGC TGCAATGCCG CGACCCATTT GGCGCTGCCT CGGGCGGTCG TCGTGGTCAG GTGACCGAGC TGGCGCGCGC CGGCATGGCT GTCGGTCTGG CGGGCCTGTT CCTGGAGTCG CATCCGGACC CGGCTAACGC GAAGTGCGAC GGTCCTTCCG CACTGCCGCT GGCGAAACTG GAGCAGTTCC TGACCCAGAT AAAAGCGATT GATGATTTGG TGAAAAGCTT CGACGAGCTG GATACAGAGA ACTGA
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Protein sequence | MKQKVVNIGD IKVANDLPFV LFGGMNVLES RDLAMRICEH YVTVTQKLGI PYVFKASFDK ANRSSIHSYR GPGLEEGMKI FQELKQTFGV KVITDVHEAS QAQPVADVVD VIQLPAFLAR QTDLVEAMAK TGAVINVKKP QFVSPGQMGN IVDKFHEGGN DKVILCDRGA NFGYDNLVVD MLGFSVMKKV SGNSPVIFDV THALQCRDPF GAASGGRRGQ VTELARAGMA VGLAGLFLES HPDPANAKCD GPSALPLAKL EQFLTQIKAI DDLVKSFDEL DTEN
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