Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B1333 |
Symbol | ldcA |
ID | 6796501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | - |
Start bp | 1300923 |
End bp | 1301837 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642775586 |
Product | L,D-carboxypeptidase A |
Protein accession | YP_002146224 |
Protein GI | 197250824 |
COG category | [V] Defense mechanisms |
COG ID | [COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000186557 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCTGT TTCATTTAAT CGCCCCCTCG GGCTACTGTA TTAACCAACA GGCCGCGTTA CGCGGCGTTC AGCGCCTGAC TGACGCGGGT CATCAGGTGG AGAATGACGA GGTGATTCGT CGCCGCTATC AGCGTTTTGC CGGTACGGAC GCGGAACGGC TGGCCGATGT TAATTCGCTG GCCTCGCTAA CGTCGCCGGA TACGATCGTC ATGCCGGTTC GCGGCGGCTA TGGCGCCAGC CGCTTGCTGG ATCGTATCGA CTGGCAGGCG CTCGCCTCCC GGCAACAGTG CGATCCCTTA CTGATTTGCG GTCATAGCGA TTTTACGGCG ATTCAGGCTG GACTCCTGGC GCAGGCCAAT GTCATCACCT TTAGCGGTCC TATGCTGGCG GCAAATTTTG GCGCCGAAAC GCTGAATACG TTCACCGAGC AACATTTCTG GCTGGCGCTA CGCAAGGCGC AATTTACCGT AGAGTGGCAA GGCGACGGCC CTCAGTGCGA CGTACAGGGC ACCTTATGGG GCGGAAATCT GGCGATGTTG ATTTCCCTTA TCGGTACGCC CTGGATGCCG ACTATCGATA AAGGAATTTT AGTGCTGGAA GATGTCAATG AGCATCCTTT CCGGGTGGAG CGTATGCTTT TGCAACTGGA GTACGCCGGA ATTTTAAACC GCCAGAGCGC CATCGTTCTC GGCAGCTTTA GCGGCGCGGC GCCCAACGAG TATGACGCCG GCTATTCTCT GGAGAGCGTC TACGCGTTTT TACGTTCCCG TCTGTCCGTT CCGCTGATTA CCGGTCTCGA CTTCGGGCAT GAACAGCGTA CGGTGACGCT CCCTATCGGG GCAAACGCAA CGCTTAAAAA TACGCGCCAG GGGACTCAAC TCACTTTATC TGGTCATCCT ACGCTGCAAT TGTAA
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Protein sequence | MSLFHLIAPS GYCINQQAAL RGVQRLTDAG HQVENDEVIR RRYQRFAGTD AERLADVNSL ASLTSPDTIV MPVRGGYGAS RLLDRIDWQA LASRQQCDPL LICGHSDFTA IQAGLLAQAN VITFSGPMLA ANFGAETLNT FTEQHFWLAL RKAQFTVEWQ GDGPQCDVQG TLWGGNLAML ISLIGTPWMP TIDKGILVLE DVNEHPFRVE RMLLQLEYAG ILNRQSAIVL GSFSGAAPNE YDAGYSLESV YAFLRSRLSV PLITGLDFGH EQRTVTLPIG ANATLKNTRQ GTQLTLSGHP TLQL
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