| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B1330 |
|---|
| Symbol | |
|---|
| ID | 6796706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | + |
|---|
| Start bp | 1296648 |
|---|
| End bp | 1297946 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642775583 |
|---|
| Product | D-amino acid dehydrogenase small subunit |
|---|
| Protein accession | YP_002146221 |
|---|
| Protein GI | 197249818 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00000545747 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGTTG TCATCCTGGG GAGTGGCGTA GTTGGCGTGA CCAGCGCCTG GTACTTGAGT
CAGGCGGGGC ATGATGTCAC CGTCATCGAT CGCGAATCCG GCCCGGCGCA AGAAACCAGC
GCGGCGAATG CCGGACAAAT TTCACCGGGA TATGCTGCGC CCTGGGCGGC CCCTGGCGTA
CCGCTGAAGG CGATAAAATG GATGTTCCAG CGCCATGCGC CGCTGGCGGT ACGTCTGGAT
GGCACTCCGT TTCAACTGAA GTGGATGTGG CAAATGCTGC GTAACTGCGA TACCCGGCAT
TATATGGAAA ATAAAGGCCG CATGGTGCGC CTGGCGGAAT ATAGTCGCGA CTGTCTGAAA
ACGCTACGCG CCGCGACCGG TATCGAATAT GAAGGCCGCC AGGGGGGAAC GCTACAACTC
TTCCGCACCG CGCAACAGTA TGAGAACGCC ACCCGTGATA TCGCCGTACT GGAAGATGCC
GGGGTGCCGT ATCAGCTCCT GGAAGCCAGC CGACTGGCGG AAGTTGAACC CGCTCTGGCT
GAGGTTGCGC ATAAATTAAC CGGCGGACTG CGCTTACCGA ATGATGAAAC CGGGGACTGT
CAGCTCTTTA CCCAGCGTCT GGCGCGCATG GCGGAGCAGG CGGGCGTAAC CTTTCGCTTT
AATACTCCCG TGGAAAAATT ACTGTACGAA AATGATCAGA TTTACGGCGT GAAATGCGCC
GATGAGATCA TTAAAGCAGA TGCGTATGTC ATGGCGTTTG GATCGTATTC GACGGCGATG
CTTAAAGGCA TTGTTGATAT CCCGGTGTAT CCGCTGAAAG GCTATTCATT AACCATCCCA
ATCGTCGAGC CAGACGGCGC GCCGGTATCG ACGATTCTTG ATGAAACCTA CAAAATCGCT
ATTACGCGTT TTGATAAGCG TATTCGCGTG GGGGGAATGG CGGAAATCGT GGGCTTTAAT
ACCGACTTAC TGCAACCGCG CCGCGAGACG CTGGAGATGG TTGTGCGCGA TCTCTTTCCG
CGCGGCGGTC ATATTGAGCA GGCCACATTC TGGACCGGCC TGCGCCCCAT GACGCCGGAC
GGCACGCCGG TAGTAGGACG TACCCGTTAT AAAAATCTGT GGCTTAATAC TGGACACGGC
ACGTTAGGCT GGACGATGGC CTGCGGTTCA GGCCAGTTGT TAAGCGATAT CTTGTCGGGT
CGTACGCCAG CGATACCCTA CGACGATCTG AGCGTGGCGC GATACCGTTC CGATTTTACG
CCCACCCGCC CGCAACGTTT GCATAGCGCG CATAACTGA
|
|---|
| Protein sequence | MRVVILGSGV VGVTSAWYLS QAGHDVTVID RESGPAQETS AANAGQISPG YAAPWAAPGV
PLKAIKWMFQ RHAPLAVRLD GTPFQLKWMW QMLRNCDTRH YMENKGRMVR LAEYSRDCLK
TLRAATGIEY EGRQGGTLQL FRTAQQYENA TRDIAVLEDA GVPYQLLEAS RLAEVEPALA
EVAHKLTGGL RLPNDETGDC QLFTQRLARM AEQAGVTFRF NTPVEKLLYE NDQIYGVKCA
DEIIKADAYV MAFGSYSTAM LKGIVDIPVY PLKGYSLTIP IVEPDGAPVS TILDETYKIA
ITRFDKRIRV GGMAEIVGFN TDLLQPRRET LEMVVRDLFP RGGHIEQATF WTGLRPMTPD
GTPVVGRTRY KNLWLNTGHG TLGWTMACGS GQLLSDILSG RTPAIPYDDL SVARYRSDFT
PTRPQRLHSA HN
|
|---|
| |