Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B1281 |
Symbol | yebU |
ID | 6796689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | - |
Start bp | 1250618 |
End bp | 1252057 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642775537 |
Product | rRNA (cytosine-C(5)-)-methyltransferase RsmF |
Protein accession | YP_002146175 |
Protein GI | 197248818 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
TIGRFAM ID | [TIGR00446] NOL1/NOP2/sun family putative RNA methylase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0638049 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCTCAAC ACGCTGTCTA TTTTCCTGAC GCTTTTCTGA CGCAAATGCG TGAAGCAATG CCTTCCACGC TCTCTTTTGA TGAATTTATT TCGGCCTGCC AACGCCCGTT GCGCCGCAGT ATACGCATCA ATACGCTTAA AATATCCGTG GCTGATTTCC TTGCCCTAAT CGCGCCCTAC GGCTGGTCGC TCACGCCAAT TCCGTGGTGT CATGAAGGAT TCTGGATCGA GCGCGATGAT GAAGAGGCAT TGCCGCTTGG CAGTACCGCT GAGCATTTAA GCGGCCTGTT TTACATTCAG GAGGCCAGTT CGATGCTGCC GGTCGCGGCC CTGTTCGCCG ATGATAATCA TCCGCAGCGG GTTATGGATA TGGCAGCGGC GCCTGGCTCC AAAACCACGC AGATCGCTGC CCGCATGGGG AACCGCGGCG CCATTCTGGC CAACGAATTT TCGGCCAGCC GCGTCAAAGT TCTGCACGCT AATATCAGCC GATGTGGAAT CGCCAATACC GCACTGACGC ATTTCGATGG CCGCGTATTT GGCGCTGCGT TACCGGAGAT GTTTGACGCT ATCCTGCTGG ATGCGCCCTG CTCTGGCGAA GGCGTAGTAC GTAAAGATCC TGATGCGCTA AAAAACTGGT CGCCAGAAAG CAATCTGGAT ATCGCGGCTA CACAGCGGGA ACTGCTCGAC AGCGCTTTTC ATGCTTTGCG ACCCGGCGGC ACTCTGGTCT ACTCCACCTG CACGTTAAAT CGCCAGGAAA ACGAAGAGGT CTGCCTCTGG CTAAAAGAGA CCTACGCCGA CGCCGTTGAA TTTTTGCCGC TGGATGATCT GTTTCCTGAC GCTGACCGCG CCCTCACCCC GGAAGGCTTC CTGCACGTCT TCCCACAAAT TTACGACTGC GAAGGATTCT TCGTCGCACG TCTGCGTAAA ATATCATCCC TTCCAGCCAT GCCCGCGCCG GGGTATAAAG TGGGGACGTT TCCTTTTACC CCCCTCAAAG GCCGCGAAGC ATTACACGTT ACCCAGGCGG CCAACGCCGT CGGACTGCTA TGGGATGAAA ATCTCCATCT TTGGCAGCGT GAAAAAGAGG TCTGGCTGTT CCCGGCAGAG ATTGAATCAC TGATCGGAAA AGTCCGTTTT TCCCGGCTCG GCATTAAACT GGCCGAAAGT CATAATAAAG GCTATCGCTG GCAACATGAG GCGACGATAG CCCTTGCCTG CCCGACTCAT GCTCACGCGT TCGAACTCTC TGCGCAAGAG GCGGAGGAGT GGTATCGCGG TCGGGATATT TATCCGCAAA CACCCCCTGC CGCTGATGAT GTCCTGGTGA CGTTCCAGCG TCAGCCGCTT GGTCTGGCAA AACGTATCGG CTCAAGAATA AAGAACAGTT ACCCGCGTGA ACTGGTACGT GATGGCAAAC TCTTTACTGG TAATAGTTAA
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Protein sequence | MAQHAVYFPD AFLTQMREAM PSTLSFDEFI SACQRPLRRS IRINTLKISV ADFLALIAPY GWSLTPIPWC HEGFWIERDD EEALPLGSTA EHLSGLFYIQ EASSMLPVAA LFADDNHPQR VMDMAAAPGS KTTQIAARMG NRGAILANEF SASRVKVLHA NISRCGIANT ALTHFDGRVF GAALPEMFDA ILLDAPCSGE GVVRKDPDAL KNWSPESNLD IAATQRELLD SAFHALRPGG TLVYSTCTLN RQENEEVCLW LKETYADAVE FLPLDDLFPD ADRALTPEGF LHVFPQIYDC EGFFVARLRK ISSLPAMPAP GYKVGTFPFT PLKGREALHV TQAANAVGLL WDENLHLWQR EKEVWLFPAE IESLIGKVRF SRLGIKLAES HNKGYRWQHE ATIALACPTH AHAFELSAQE AEEWYRGRDI YPQTPPAADD VLVTFQRQPL GLAKRIGSRI KNSYPRELVR DGKLFTGNS
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