Gene SeAg_B1235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B1235 
SymbolmsbB 
ID6795139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand+ 
Start bp1219639 
End bp1220610 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content53% 
IMG OID642775496 
Productlipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 
Protein accessionYP_002146134 
Protein GI197247642 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID[TIGR02208] lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0136133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACCA AAAAAAATAA TAGTGAGTAT ATCCCTGAAT TCGAAAAATC CTTTCGCTAT 
CCGCAGTATT GGGGCGCCTG GTTGGGCGCT GCGGCAATGG CGGGGATCGC ATTAACACCG 
GCATCATTCC GCGACCCTTT GCTGGCGACG CTGGGGCGTT TTGCCGGACG GCTGGGGAAG 
AGTTCTCGTC GCCGGGCGCT AATTAATCTG TCGTTGTGCT TTCCGCAGCG TAGCGAAGCT 
GAGCGCGAAG CGATTGTCGA TGAGATGTTC GCCACCGCGC CACAGGCAAT GGCGATGATG 
GCTGAGTTGG CGATGCGCGG TCCGAAAAAA ATTCAACAGC GTGTTGACTG GGAAGGTCTG 
GAAATCATTG AGGAGATGCG TCGTAACGAC GAAAAAGTCA TTTTTCTCGT ACCGCATGGC 
TGGGGCGTCG ACATTCCAGC CATGCTGATG GCCTCTCAGG GGCAAAAAAT GGCGGCGATG 
TTTCATAATC AGGGTAATCC GGTTTTTGAC TATATCTGGA ACACAGTGCG TCGGCGTTTC 
GGCGGACGTT TGCATGCGCG TAATGACGGG ATTAAACCCT TTATTCAGTC TGTTCGTCAG 
GGCTACTGGG GCTACTACCT GCCGGACCAG GATCACGGCC CGGAGCATAG TGAATTCGTT 
GATTTCTTTG CGACATACAA AGCGACGCTG CCTGCGATTG GTCGGCTGAT GAAAGTGTGC 
CGCGCACGCG TGATACCGCT TTTCCCGGTG TATAATGGTA AAACGCATCG CCTGAGTATC 
CAGATTCGCC CGCCAATGGA CGATCTGCTC ACGGCTGACG ACCACACTAT CGCCAGACGG 
ATGAACGAAG AGGTCGAAAT TTTTGTCGGC CCGCATCCGG AACAGTACAC CTGGATCCTG 
AAGCTGCTCA AAACCCGCAA GCCAGGCGAG ATTCAGCCGT ATAAGCGTAA AGATCTTTAT 
CCCATCAAAT AA
 
Protein sequence
METKKNNSEY IPEFEKSFRY PQYWGAWLGA AAMAGIALTP ASFRDPLLAT LGRFAGRLGK 
SSRRRALINL SLCFPQRSEA EREAIVDEMF ATAPQAMAMM AELAMRGPKK IQQRVDWEGL 
EIIEEMRRND EKVIFLVPHG WGVDIPAMLM ASQGQKMAAM FHNQGNPVFD YIWNTVRRRF 
GGRLHARNDG IKPFIQSVRQ GYWGYYLPDQ DHGPEHSEFV DFFATYKATL PAIGRLMKVC 
RARVIPLFPV YNGKTHRLSI QIRPPMDDLL TADDHTIARR MNEEVEIFVG PHPEQYTWIL 
KLLKTRKPGE IQPYKRKDLY PIK