Gene SeAg_B1188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B1188 
Symbol 
ID6793596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand+ 
Start bp1176043 
End bp1176681 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content49% 
IMG OID642775450 
Producthypothetical protein 
Protein accessionYP_002146088 
Protein GI197249880 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000157328 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTG CACTGATGAT GGAAAATAGC CAGGCCAGCA AAAATGCCAT CATTTATAAC 
GGACTTAGCG CCGTCGCCAA TGAAAAGGGA TTTCCCGTTT TTAATGTCGG CATGTGCGAC 
GAAAATGACC ATCACCTGAC GTACATTCAT TTAGGCATCA TGGCGAGTAT TTTGCTTAAT 
GCAAACGCGG TTGATTTTGT GGTTACTGGC TGTGGCACCG GGCAGGGCGC GCTGATGTCG 
TTAAATATTC ATCCAGGTGT CATTTGTGGC TATTGCATCG ATCCGGCAGA TGCTTTTCTG 
TTTGCGCAGA TCAACAACGG CAATGCGTTG TCCCTGCCAT TTGCGAAAGG CTTTGGCTGG 
GGCGCTGAGC TGAACGTGCG TTTCATCTTT GAAAAAGCGT TTACCGGGCG TAAAGGCGAG 
GGGTATCCGC CTGAGCGCAA AGCGCCGCAG GTACGCAATG CGGGCATTTT GAACCAGGTT 
AAGGCCGCGG TCGTCAAAGA GAATTATCTG GATACACTAC GGGCTATCGA TCCTGAACTG 
GTTAAAACGG CGGTTTCAGG GCCGCGTTTC CAGCAATGTT TGTTTGAAAA CGGCCAGAAT 
AAAGAAATAG AAGCGTTTGT ACGTGAGATG CTGAGGTAA
 
Protein sequence
MKIALMMENS QASKNAIIYN GLSAVANEKG FPVFNVGMCD ENDHHLTYIH LGIMASILLN 
ANAVDFVVTG CGTGQGALMS LNIHPGVICG YCIDPADAFL FAQINNGNAL SLPFAKGFGW 
GAELNVRFIF EKAFTGRKGE GYPPERKAPQ VRNAGILNQV KAAVVKENYL DTLRAIDPEL 
VKTAVSGPRF QQCLFENGQN KEIEAFVREM LR