| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B1170 |
|---|
| Symbol | |
|---|
| ID | 6795183 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | + |
|---|
| Start bp | 1164220 |
|---|
| End bp | 1164942 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642775432 |
|---|
| Product | DNA-binding transcriptional activator SdiA |
|---|
| Protein accession | YP_002146073 |
|---|
| Protein GI | 197250905 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0141324 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGAAA ATGATTTCTT CACCTGGCGA CGCGCAATGT TGTTACGCTT TCAGGAGATG
GCGGCAGCAG AGGATGTTTA TACTGAATTG CAATATCAGA CACAGCGGCT GGAATTTGAT
TATTATGCCC TGTGTGTTCG TCATCCCGTC CCCTTTACCC GGCCTAAAAT ATCGCTTCGT
ACCACTTATC CTCCGGCGTG GGTAACGCAT TACCAGTCCG AAAACTATTT CGCGATCGAT
CCGGTATTAA AGCCGGAAAA TTTCAGGCAA GGTCATTTAC ATTGGGATGA CGTGCTATTT
CATGAAGCGC AGGCGATGTG GGATGCCGCC CAGCGTTTCG GATTACGCAG AGGCGTAACC
CAGTGTGTGA TGTTGCCGAA CCGGGCGCTG GGCTTTTTAT CTTTCTCTCG TAGCAGTTTA
CGCTGCTCCT CGTTTACCTA CGATGAAGTG GAGCTGAGGT TGCAACTGCT GGCGCGGGAG
AGTCTTTCGG CGCTGACAAG ATTTGAAGAC GACATGGTGA TGGCGCCTGA GATGCGTTTC
AGTAAACGTG AGAAAGAGAT TCTGAAGTGG ACGGCGGAAG GGAAGACCTC ATCGGAGATC
GCCATTATTC TGTCGATTTC TGAAAATACC GTTAACTTCC ATCAGAAAAA CATGCAGAAG
AAATTCAATG CGCCAAATAA AACACAGATT GCCTGCTACG CTGCGGCGAC AGGTCTGATA
TGA
|
|---|
| Protein sequence | MQENDFFTWR RAMLLRFQEM AAAEDVYTEL QYQTQRLEFD YYALCVRHPV PFTRPKISLR
TTYPPAWVTH YQSENYFAID PVLKPENFRQ GHLHWDDVLF HEAQAMWDAA QRFGLRRGVT
QCVMLPNRAL GFLSFSRSSL RCSSFTYDEV ELRLQLLARE SLSALTRFED DMVMAPEMRF
SKREKEILKW TAEGKTSSEI AIILSISENT VNFHQKNMQK KFNAPNKTQI ACYAAATGLI
|
|---|
| |