Gene SeAg_B1167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B1167 
Symbol 
ID6797174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand+ 
Start bp1161564 
End bp1162550 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content57% 
IMG OID642775429 
ProductD-cysteine desulfhydrase 
Protein accessionYP_002146070 
Protein GI197250501 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2515] 1-aminocyclopropane-1-carboxylate deaminase 
TIGRFAM ID[TIGR01275] pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.174791 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACTAC ATCACTTAAC GCGCTTTCCT CGCCTGGAGC TTATTGGCGC GCCGACCCCG 
CTCGAATACC TGCCGCGATT GTCTGATTAT CTTGGCCGTG AGATTTACAT TAAGCGCGAT 
GACGTTACGC CCATTGCAAT GGGCGGCAAT AAACTGCGCA AGCTGGAGTT TCTGGTGGCC 
GACGCGCTGC GAGAAGGGGC GGATACGCTG ATAACCGCAG GGGCGATTCA GTCGAACCAT 
GTCCGTCAGA CGGCGGCGGT CGCGGCCAAA TTGGGACTAC ATTGCGTCGC CTTGCTGGAA 
AATCCAATCG GTACCACCGC GGAAAATTAC CTGACGAATG GTAATCGCCT GTTACTGGAT 
TTATTTAATA CGCAAATTGA GATGTGCGAT GCGCTAACCG ATCCGGATGC GCAGCTGCAA 
ACGCTGGCGA CGCGCATTGA AGCGCAAGGG TTCAGGCCCT ATGTGATTCC GGTCGGCGGC 
TCCAGCGCGC TGGGCGCAAT GGGATACGTA GAGAGCGCCC TGGAAATCGC CCAGCAGTGT 
GAAGAAGTCG TCGGGCTCTC TTCGGTGGTG GTGGCCTCCG GCAGCGCCGG AACGCACGCC 
GGGTTAGCTG TCGGGCTGGA ACATCTGATG CCGGATGTCG AACTGATTGG CGTGACCGTT 
TCACGTTCTG TCGCCGAGCA GAAACCCAAA GTGATTGCCT TACAGCAGGC TATTGCCGGT 
CAGCTGGCGC TGACGGCGAC GGCGGATATT CATTTATGGG ATGACTATTT TGCCCCGGGT 
TACGGCGTGC CAAATGACGC GGGGATGGAG GCGGTGAAAC TGCTGGCGAG CCTGGAGGGG 
GTGCTACTGG ATCCGGTATA TACCGGTAAA GCGATGGCGG GTCTGATAGA CGGCATCAGC 
CAGAAACGCT TTAACGATGA CGGGCCGATT CTCTTTATTC ACACCGGTGG GGCGCCTGCG 
CTGTTTGCCT ACCATCCTCA TGTATAA
 
Protein sequence
MPLHHLTRFP RLELIGAPTP LEYLPRLSDY LGREIYIKRD DVTPIAMGGN KLRKLEFLVA 
DALREGADTL ITAGAIQSNH VRQTAAVAAK LGLHCVALLE NPIGTTAENY LTNGNRLLLD 
LFNTQIEMCD ALTDPDAQLQ TLATRIEAQG FRPYVIPVGG SSALGAMGYV ESALEIAQQC 
EEVVGLSSVV VASGSAGTHA GLAVGLEHLM PDVELIGVTV SRSVAEQKPK VIALQQAIAG 
QLALTATADI HLWDDYFAPG YGVPNDAGME AVKLLASLEG VLLDPVYTGK AMAGLIDGIS 
QKRFNDDGPI LFIHTGGAPA LFAYHPHV