| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B1116 |
|---|
| Symbol | |
|---|
| ID | 6793518 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | + |
|---|
| Start bp | 1121135 |
|---|
| End bp | 1122100 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 642775383 |
|---|
| Product | Sel1 domain protein repeat-containing protein |
|---|
| Protein accession | YP_002146024 |
|---|
| Protein GI | 197248055 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0560927 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAA ACATATTAAT GATGGTTTTT ACAGTAATTG TTTTATTTGG AGGAGTTATT
GCTTGGCTTT ATCATTCAAA TGATAGTTTG GAAAATGTGA GTGCGAATAG TGATATAGCA
CATCTAACCA AGTTAGCAGA ACAGGGGGAT ATGAAAGCAC AAACAGATCT GGGGCTTGCT
TATGGGAGTG GTAACAGTAT CCCACAGGAT TACACAAAAG CAATGTATTG GTATAATCAG
GCTGCAAAAC AAGGTTACGC ACCAGCACAA TTTAATCTCG GTCTTTTCTA TGAAAATGGT
TGGGGTGGAA GCAGAGATCT TCAATTAGCA AAAGAATTTT ACCGTAAGGC GGCAAATCAA
GGCTTTACCA ATGCTCAAAT AAATTTAGGC ATTCTATTTA TGGATGGCAA AGGGGGAGAG
ATTGATTATG TTCAAGCCAG AAAATTATTT ATAAAGGCTG CTGAATCCAA TAATCCAGTT
GCTATTTATA ATCTGGGACA CATCTATAAT TATGGATTGG GCATTCCAAG AGATGATGTT
CAGGCTGCAA CATGGTATAG CAAAGCGGAA GATCTTGGTT CAATGAGCGC AAGAAATTCA
CTTGCTCTAT TTTATGCAAA AGGATTGGGT AATCTGCCTG TTGACAGAAA CAAGGCATTA
AAATTATTGA ATATTTCTGC TTGTCAGGGA TATGCGGTAG CTCAAAATAA TCTTGGAATA
TTATATTCTG ATGGTACAGA TGAATTATCT AAAGATTATC AGCAATCCTA CGCCTGGTTC
TCAGTGGCAT TTTATAATGG TTTTAAAGAG GCTGATACCT CACGAAACGT AATCATGGGA
AAATTAGAAA CTAAAGAAAT TGAAAAAGCT AAAGCACTTT CCACTGAATA TATTGAAAAA
TACCATACTA ATCTCAATGG AGATGACACA GATAGAGATA AAGAGTGTAA GCATTTATAC
CCGTGA
|
|---|
| Protein sequence | MKKNILMMVF TVIVLFGGVI AWLYHSNDSL ENVSANSDIA HLTKLAEQGD MKAQTDLGLA
YGSGNSIPQD YTKAMYWYNQ AAKQGYAPAQ FNLGLFYENG WGGSRDLQLA KEFYRKAANQ
GFTNAQINLG ILFMDGKGGE IDYVQARKLF IKAAESNNPV AIYNLGHIYN YGLGIPRDDV
QAATWYSKAE DLGSMSARNS LALFYAKGLG NLPVDRNKAL KLLNISACQG YAVAQNNLGI
LYSDGTDELS KDYQQSYAWF SVAFYNGFKE ADTSRNVIMG KLETKEIEKA KALSTEYIEK
YHTNLNGDDT DRDKECKHLY P
|
|---|
| |