| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B1113 |
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| Symbol | |
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| ID | 6795293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011149 |
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| Strand | + |
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| Start bp | 1113950 |
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| End bp | 1114468 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642775380 |
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| Product | hcp |
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| Protein accession | YP_002146021 |
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| Protein GI | 197247521 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
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| TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAACAC CGTGTTACAT CTCAATTACG GGGCAAACCC AGGGCAATAT CACCGCTGGT
GCATTCACCG CAGATTCTGT CGGCAATATC TACGTGCAGG GTCACGAGGA TGAAATGCTG
GTACAGGAAT TCCTGCATAA CGTGACCGTA CCCACCGATC CACAGTCCGG GCAGCCGAGC
GGCCAGCGTT CGCACAAGCC GTTCATTTTT ACCGTGGCGC TGAACAAAGC CGTACCGCTG
CTGTACAACG CGCTGGCGTC CGGTGAAATG CTGCCGAAAA CCGAACTGCA CTGGTGGCGT
ACTTCCGTTG AAGGCAAGCA GGAGCATTAC TTCACCACCC GCCTGACGGA CTCAACGATT
GTGGATATGA AACTGCATAT GCCGCACTGT CAGGACCCGG CAAAGCGCGA ATTCACGCAG
TTGCTCGAAG TCTCGCTGGC CTACCGCAAA ATCGAGTGGG AACACGTCAA ATCCGGCACC
TCTGGCGCGG ATGACTGGCG CGCGCCGCTG GAAGCGTAA
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| Protein sequence | MPTPCYISIT GQTQGNITAG AFTADSVGNI YVQGHEDEML VQEFLHNVTV PTDPQSGQPS
GQRSHKPFIF TVALNKAVPL LYNALASGEM LPKTELHWWR TSVEGKQEHY FTTRLTDSTI
VDMKLHMPHC QDPAKREFTQ LLEVSLAYRK IEWEHVKSGT SGADDWRAPL EA
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