| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B1097 |
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| Symbol | |
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| ID | 6793734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011149 |
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| Strand | - |
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| Start bp | 1093488 |
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| End bp | 1093967 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 642775364 |
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| Product | type VI secretion system effector, Hcp1 family |
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| Protein accession | YP_002146005 |
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| Protein GI | 197251451 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
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| TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAATT TAAGTTATTT GACACTTAAT GGAGAAAAAC AGGGACTGAT TTCAGCGGGG
TGTTCATCAA TGGCATCCAT TGGCAATAAG GCACAAATCG CTCACATCGA TCAAATTTTA
GTCCTGGCCC TTGAACATGG CGTCACGCGG AATCAAAACG TAAACCACCT TGCTCTGACT
ATTCGAAAAC CAGTGGATAA AGCTACTCCT TTGTTAAATA AAGCAATTAC AGAAAATGAA
ATTCTGACCT GCGATATTGA GTTTTACCGG ACTAATCGCT TCGGTATAAA TGAGATGTAT
TACAAAATAC AGTTGCTTAA AGCCCGTATT GCAAGCATTC ATTTAATAGT TCCACATACG
GTAAGCAGCA GTGACGGGCA ACCGGAAGAA AATATATCAT TTATTTATGA AACATTTACG
CATGAACATT GTATTGCGGG GACCAGTGCA TTCAGCACCT GGAATACGCG TCTTTTTTAA
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| Protein sequence | MANLSYLTLN GEKQGLISAG CSSMASIGNK AQIAHIDQIL VLALEHGVTR NQNVNHLALT
IRKPVDKATP LLNKAITENE ILTCDIEFYR TNRFGINEMY YKIQLLKARI ASIHLIVPHT
VSSSDGQPEE NISFIYETFT HEHCIAGTSA FSTWNTRLF
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