Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B1088 |
Symbol | |
ID | 6793807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | - |
Start bp | 1086220 |
End bp | 1086903 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642775355 |
Product | integrase, catalytic region |
Protein accession | YP_002145996 |
Protein GI | 197249426 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.811096 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGCCG ATAAAACGCT GAATATCGGA CGGGACCGTC TGTTTAATCT GCTGGGTGAA TACCGGCTCC TGGTACCCGT GAAACGGGCA TATCACAAAA CCACCAACAG CCATCATCGC TTTTACCGGC ATCCTAATCT GCTGAAACCC GGCCCTGAAC AGGTTACCGC CCTTGAGCCA GAGCAGGTCT GGGTCGCCGA TATTACTTAC CTTCCACTAC GCAGCGGCAC GGCCTGTCTG AGTCTGGTCA CCGATGCCTG CTCCAGAAAA ATCGTGGGTT ACCATGTCGG GGAAAACCTG CAGACAGAAA ATGTGGTAAA GGCATTCAGG CAGGCTCTGA GGCGGAGAAA AACGACAGGT CCGCTGGTAC ATCACTCTGA CAGAGGACTG CAATACTGTT CGGTACTTTA TCAGTCAGTT CATGAGCGAA ACGGAATAAC CTGTTCAATG ACCGATGGTT ACGACTGCTA CCAGAATGCG CTGGCTGAGA GAATAAACGG GATACTGAAA AATGAGTTTT TACTCTCGCG TCCTGCAGAT CTGGCGCAAG CGCGGGAAAT AGTAAAAGAG TCCGTGGCAA TTTATAACCA TGAACGGCCA CACCTGGCCC TGAAATACAA AACGCCCGAT GATGTTCATC AGGCGTTTTA CAGACAAAAA ACTGTCAACC TATATCAGGA CTAG
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Protein sequence | MQADKTLNIG RDRLFNLLGE YRLLVPVKRA YHKTTNSHHR FYRHPNLLKP GPEQVTALEP EQVWVADITY LPLRSGTACL SLVTDACSRK IVGYHVGENL QTENVVKAFR QALRRRKTTG PLVHHSDRGL QYCSVLYQSV HERNGITCSM TDGYDCYQNA LAERINGILK NEFLLSRPAD LAQAREIVKE SVAIYNHERP HLALKYKTPD DVHQAFYRQK TVNLYQD
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