Gene SeAg_B1059 details

Gene Information

• Locus tag: SeAg_B1059
• Symbol: hpaR
• ID: 6795542
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Agona str. SL483
• Kingdom: Bacteria
• Replicon accession: NC_011149
• Strand: -
• Start bp: 1057496
• End bp: 1057936
• Gene Length: 441 bp
• Protein Length: 146 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 642775328
• Product: homoprotocatechuate degradation operon regulator, HpaR
• Protein accession: YP_002145969
• Protein GI: 197251393
• COG category: [K] Transcription
• COG ID: [COG1846] Transcriptional regulators
• TIGRFAM ID: [TIGR02337] homoprotocatechuate degradation operon regulator, HpaR

Plasmid Coverage information

• Num covering plasmid clones: 41
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATGATT CATTAACCAT CGCCTTGCTT CAGGCGCGCG AAGCGGCAAT GACCTATTTC 
CGCCCCATCG TTAAAAGCCA CAATCTGACC GACCAGCAAT GGCGCATTGT GCGAATCCTG 
GCCGATAGCC CCTCTATGGA TTTTCACGAG CTGGCCTTTC GTACCTGTAT TTTGCGTCCA 
AGTCTGACCG GAATATTGAC GCGCATGGAG CGAGACGGAC TGGTGTTGCG ACTCAAGCCG 
GTTAACGATC AGCGTAAGTT ATATGTCATG TTGACGGAGC AGGGACAAAC GTTGTACGCC 
CGTGCCCGAA GCCAGGTAGA AGAGGCTTAT CGAAAAATTG AGGCCGATTT CACGCCCGAA 
AAAACACAGC AATTGATGCT GCTGCTGGAC GATCTTATTG CTCTGGGACG CCAGCATCCT 
GATAGCGAAG CGGAAGCATA G 

 

Protein sequence

MHDSLTIALL QAREAAMTYF RPIVKSHNLT DQQWRIVRIL ADSPSMDFHE LAFRTCILRP 
SLTGILTRME RDGLVLRLKP VNDQRKLYVM LTEQGQTLYA RARSQVEEAY RKIEADFTPE 
KTQQLMLLLD DLIALGRQHP DSEAEA