Gene SeAg_B1040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B1040 
Symbol 
ID6792831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand
Start bp1042293 
End bp1043081 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content54% 
IMG OID642775309 
Productregulatory protein 
Protein accessionYP_002145951 
Protein GI197247657 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.907674 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGGAGA TGCATATTCG ACATCAGGAT CTTACGACGG CAGAGGTGCG TTCCAGTCAT 
CTGCACCGTT TGCATCGTGT TACGCTTTTT TCCGCCGCTA TCTGCCATAT TACGCAGGGC
AGTAAAGTCA TCATTCAGGA TGATAGCCGC CTTGTCGCCG GGCCGGGCGA GTTGATTATT
ATTCCAGCGA ACACGCCGCT GGAGATTATT AATCAGCCTG CGCAGAACGG TTTTCGCTCC
GACCTGTTGT TACTTTCACC GGAGATTATT GCTCGCTTTA AAACGATGTA CGTTCAGGAT
TATCCACCGG CAAACCTGAC ATCGCTGTGT ACGCCGATGA GCCGTAGCCT GACATTTATG
TGGGAGAACG TGTTGGATGC TGTGCGCCAG GGTTTACCCG TTGGGCTACA GGAACATCAG
GCGATGGGGT TACTGTTAGC GCTTTTGCAT GATGGCGCGG CAGGACCGCT GCTTATTGAA
CGGCGTTACA CCCTCACGGA GCAGGTGCGG CAACTGATTA TGCTCTCGCC TGCTAAGCTA
TGGACAGCCC AGGAGATAGC CCGCCGTCTT GCTATGGGAA CATCGACGCT GCGTCGGCGT
TTGCAGCGCG AATCGCAGAG TTATCGACAA ATTGTTGAAG AGGTGCGCAT GTCCTGCGCG
CTTTCTCAAC TGCAATCGAC GACGCTGCCG ATCGGCGAAA TAGCGCTACG GTGCGGTTAC
CTGTCGGGGT CGAGATTTAC GGCCAGATTC CGCCAACATT ATGGGTGTCT GCCCAGTCAG
GTACGTTAA
 
Protein sequence
MQEMHIRHQD LTTAEVRSSH LHRLHRVTLF SAAICHITQG SKVIIQDDSR LVAGPGELII 
IPANTPLEII NQPAQNGFRS DLLLLSPEII ARFKTMYVQD YPPANLTSLC TPMSRSLTFM
WENVLDAVRQ GLPVGLQEHQ AMGLLLALLH DGAAGPLLIE RRYTLTEQVR QLIMLSPAKL
WTAQEIARRL AMGTSTLRRR LQRESQSYRQ IVEEVRMSCA LSQLQSTTLP IGEIALRCGY
LSGSRFTARF RQHYGCLPSQ VR