Gene SeAg_B1016 details

Gene Information

• Locus tag: SeAg_B1016
• Symbol: pyrD
• ID: 6796381
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Agona str. SL483
• Kingdom: Bacteria
• Replicon accession: NC_011149
• Strand: +
• Start bp: 1016511
• End bp: 1017521
• Gene Length: 1011 bp
• Protein Length: 336 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 642775286
• Product: dihydroorotate dehydrogenase 2
• Protein accession: YP_002145928
• Protein GI: 197251167
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0167] Dihydroorotate dehydrogenase
• TIGRFAM ID: [TIGR01036] dihydroorotate dehydrogenase, subfamily 2

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.00000000845277
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTACTATC CCTTCGTTCG TAAAGCCCTT TTCCAGCTCG ATCCAGAGCG CGCTCATGAA 
TTTACATTTC AACAATTACG CCGCATTACA GGTACGCCGC TGGAAGCGCT GGTGCGCCAG 
AAAGTACCGA CAAAGCCGGT TACCTGCATG GGACTTACCT TTAAAAATCC ACTGGGGCTG 
GCTGCCGGTC TGGATAAAGA CGGGGAGTGC ATCGACGCGT TAGGCGCGAT GGGGTTTGGC 
TCCCTGGAAA TCGGCACCGT GACGCCGCGC CCACAGCCGG GTAACGATAA GCCGCGTCTT 
TTTCGTCTGG TGGATGCTGA AGGTCTCATC AATCGGATGG GCTTTAATAA TCTGGGCGTC 
GATAACCTGG TCGAGAATGT TAAAAAAGCC CATTTTGATG GTATTCTGGG AATTAACATC 
GGTAAAAATA AAGATACACC TGTCGAAAAT GGCAAAGATG ACTACCTGAT TTGTATGGAA 
AAAGTCTATG CTTATGCGGG TTATATCGCC ATTAATATTT CTTCGCCGAA TACGCCAGGG 
CTACGTACGC TCCAGTATGG CGATGCGCTG GACGATCTGT TAACTGCCAT TAAAAATAAG 
CAAAACGATC TTCAGGCGAT CCATCATAAA TATGTGCCGG TAGCAGTAAA GATCGCGCCG 
GATCTTTGTG AAGAGGAATT GATCCAGGTT GCCGATAGCC TGCTTCGTCA TAATATTGAT 
GGGGTGATTG CGACAAATAC CACCCTCGAT CGTTCTCTGG TACAAGGAAT GAAAAATTGC 
CAGCAAACGG GGGGATTAAG TGGCCGGCCA TTACAATTAA AAAGCACAGA AATTATTCGC 
CGTTTATCCC AGGAGTTAAA AGGACAATTG CCTATTATCG GCGTCGGCGG CATTGACTCA 
GTTATCGCCG CGCGCGAGAA GATAGCGGCA GGAGCTACGC TGGTACAAAT TTATTCCGGT 
TTTATTTTTA AAGGCCCGCC ATTGATTAAA GAAATCGTAA CGCACATCTA A 

 

Protein sequence

MYYPFVRKAL FQLDPERAHE FTFQQLRRIT GTPLEALVRQ KVPTKPVTCM GLTFKNPLGL 
AAGLDKDGEC IDALGAMGFG SLEIGTVTPR PQPGNDKPRL FRLVDAEGLI NRMGFNNLGV 
DNLVENVKKA HFDGILGINI GKNKDTPVEN GKDDYLICME KVYAYAGYIA INISSPNTPG 
LRTLQYGDAL DDLLTAIKNK QNDLQAIHHK YVPVAVKIAP DLCEEELIQV ADSLLRHNID 
GVIATNTTLD RSLVQGMKNC QQTGGLSGRP LQLKSTEIIR RLSQELKGQL PIIGVGGIDS 
VIAAREKIAA GATLVQIYSG FIFKGPPLIK EIVTHI