Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B0961 |
Symbol | cydC |
ID | 6793332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | - |
Start bp | 946968 |
End bp | 948689 |
Gene Length | 1722 bp |
Protein Length | 573 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642775232 |
Product | cysteine/glutathione ABC transporter membrane/ATP-binding component |
Protein accession | YP_002145874 |
Protein GI | 197249403 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4987] ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components |
TIGRFAM ID | [TIGR02868] thiol reductant ABC exporter, CydC subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.446382 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCGCGC TACTCCCTTA TCTGACGCTT TATAAACGCC ATAAATGGAT GCTAACGCTG GGAATTGCGC TGGCAATCCT GACCCTGCTT GCCAGTATCG GGCTGCTGAC GCTTTCCGGC TGGTTCCTGT CCGCGTCCGC TATCGCAGGC TTCGCGGGAA TTTACAGTTT TAACTATATG CTCCCGGCGG CCGGCGTGCG CGGCGCGGCC ATTACCCGTA CCGCCGGTCG TTATTTTGAA CGTCTGGTAA GTCATGACGC CACGTTCCGC GTGCTGCAAC ATCTGCGTAT TTATACCTTC AGCAAACTTT TACCGCTCTC CCCCGCGGGT CTGGCGCGAT ATCAGCAAGG TGAACTGCTG AACCGCATCG TTGCCGACGT CGACACGCTG GACCATCTCT ATTTGCGCGT CATCTCCCCG CTGGTCGGCG CTTTTGTAGT GATTATGATT GTCACCCTGG GGCTTAGCGT TCTCGACGTG ACGCTGGCGA TCACGCTGGG CGGCATTATG CTGTTGACGC TGTTTATTAT GCCGCCGGTG TTTTATCGCG CCGGCAAAAA TACCGGCCAA AATCTGACAC ATCTACGAGG TCAGTATCGC CAGCAGCTCA CGTCATGGTT ACAGGGCCAG GCGGAACTCA CCATTTTTGG CGCCAGCAAA CGCTATCGGG CGCAAATGGA AGCCACCGAA TTACAATGGC ATGAGGCCCA ACGCCGACAG TCTGAACTGA CCGCCTTATC GCAGGCGTTA ATGCTGCTGA TTGGCGCGCT GGCGGTGATG TTAATGTTGT GGATGGCCTC CGGCGGCGTT GGCGGCAATA CGCAGCCCGG CGCGCTCATC GCGCTGTTTG TCTTCTGCGC GCTGGCGGCT TTCGAGGCGC TTGCGCCCGT TACCGGCGCA TTCCAGCATC TGGGGCAGGT TATCGCCTCT GCGCTTCGTA TCACTGAATT AACGGAGCAA AAACCGGAGG TGACCTTTCC ACAGGCAGAA ACTCCCGCGC CGGAAAAGGT CACACTCACC CTGCGGGACG TTTCGTTTCG TTATCCCGAC CAGCCGATTA ATGCGCTCAA TGCCCTCTCA TTACAGGCTA ATCCTGGCGA GCATGTCGCT ATTCTGGGGC GTACCGGCTG CGGAAAATCA ACGCTGTTGC AGCTACTCAC CCGCGCCTGG GACCCGCAAC AAGGCGAAAT TCTGCTCAAC GATCTTCCGC TATCCTCGCT GAGCGAATCC GCCTTACGCC GGACTATCAG CGTGGTGCCG CAGCGTGTCC ACCTGTTCAG CGCCACGCTG CGTGATAATT TATTACTGGC GGCGCCCAAT GCCAGCGACG AAGCCCTTTC CGACATGCTG CGTCGCGTCG GCCTCGAAAA TCTGCTCGAA GATAGTGGGC TTAATAGCTG GCTCGGCGAA GGCGGTCGCC TGCTATCCGG CGGCGAACTT CGTCGTCTGG CCATCGCCCG CGCGCTGTTG CATGATGCTC CGTTAATGCT GTTGGATGAG CCCACTGAGG GGCTGGATGC GACCACCGAG AGCGAAATGC TGGAATTACT TGCCGATGTG ATGCGCGAGA AAACCGTCCT GATGGTGACG CACCGTTTGC GCGGCCTGGC CCGTTTTGAT CAAATCATCG TAATGGACGA CGGGCGCATC ATTGAGCAAG GCACTCATGC AGAATTGTTA GCCGGACAAG GGCGCTATTA TCAGTTTAAA CAACGTCTGT AA
|
Protein sequence | MRALLPYLTL YKRHKWMLTL GIALAILTLL ASIGLLTLSG WFLSASAIAG FAGIYSFNYM LPAAGVRGAA ITRTAGRYFE RLVSHDATFR VLQHLRIYTF SKLLPLSPAG LARYQQGELL NRIVADVDTL DHLYLRVISP LVGAFVVIMI VTLGLSVLDV TLAITLGGIM LLTLFIMPPV FYRAGKNTGQ NLTHLRGQYR QQLTSWLQGQ AELTIFGASK RYRAQMEATE LQWHEAQRRQ SELTALSQAL MLLIGALAVM LMLWMASGGV GGNTQPGALI ALFVFCALAA FEALAPVTGA FQHLGQVIAS ALRITELTEQ KPEVTFPQAE TPAPEKVTLT LRDVSFRYPD QPINALNALS LQANPGEHVA ILGRTGCGKS TLLQLLTRAW DPQQGEILLN DLPLSSLSES ALRRTISVVP QRVHLFSATL RDNLLLAAPN ASDEALSDML RRVGLENLLE DSGLNSWLGE GGRLLSGGEL RRLAIARALL HDAPLMLLDE PTEGLDATTE SEMLELLADV MREKTVLMVT HRLRGLARFD QIIVMDDGRI IEQGTHAELL AGQGRYYQFK QRL
|
| |