| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B0945 |
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| Symbol | cspD |
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| ID | 6792522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011149 |
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| Strand | - |
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| Start bp | 935824 |
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| End bp | 936045 |
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| Gene Length | 222 bp |
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| Protein Length | 73 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642775218 |
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| Product | cold shock domain protein CspD |
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| Protein accession | YP_002145861 |
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| Protein GI | 197248616 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | [TIGR02381] cold shock domain protein CspD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.00738434 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAACGG GTACTGTAAA GTGGTTCAAC AATGCCAAAG GGTTTGGTTT CATCTGCCCT
GAAGGCGGCG GCGAGGATAT TTTCGCCCAT TATTCCACCA TTCAAATGGA TGGTTACAGA
ACGCTTAAAG CCGGACAGTC TGTCCGGTTT GATGTCCACC AGGGGCCAAA AGGCAATCAC
GCCAGCGTCA TCGTGCCCAT CGAAGCAGAG GCCGTTGCAT AG
|
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| Protein sequence | METGTVKWFN NAKGFGFICP EGGGEDIFAH YSTIQMDGYR TLKAGQSVRF DVHQGPKGNH
ASVIVPIEAE AVA
|
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