Gene SeAg_B0904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B0904 
Symbol 
ID6795428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand
Start bp897329 
End bp898540 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content58% 
IMG OID642775179 
Productinner membrane protein YbjJ 
Protein accessionYP_002145822 
Protein GI197248988 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGTCC TCTCCTCACG TAACGCCTTA AAACGCCGTA CCTGGGCGCT GTTTATGTTC 
TTCTTTTTAC CCGGACTGCT GATGGCCTCC TGGGCAACCC GAACGCCTGC TATTCGGGAT
ATTCTTTCCG TCTCTACCGC GGAAATGGGG GCGGTCTTAT TCGGGCTTTC TATCGGTTCA
ATGAGCGGTA TTCTTTGTTC CGCCTGGCTG GTGAAACGAT TTGGCACCCG GAAGGTTATT
CGCACGACGA TGACCTGCGC AGTAACCGGG ATGGTTATTC TTAGCGTCGC GCTGTGGTGC
GCCTCGCCGC TGATTTTTGC CCTTGGATTA GCCGTTTTCG GCGCCAGTTT TGGCGCAGCC
GAAGTGGCGA TTAATGTCGA AGGCGCGGCG GTCGAACGCG AGCTGAATAA AACTGTTCTG
CCGATGATGC ATGGTTTCTA CAGTTTCGGC ACGCTGGCGG GCGCTGGTGT CGGCATGGCG
TTAACCGCAT TAAGCGTCCC GGCTAACATC CATATCATCC TCGCGGCTGC CGTGGCGATC
GCGCCCATTT TTATCGCCAT TCGGGCGATC CCTGACGGTA CGGGTAAAAA CGCATCGGAA
GATGCTCACC TTCAGGAAAA AGGATTACCT TTTTATCGGG ACATCCAGCT TTTGCTTATT
GGCGTGGTGG TGCTGGCAAT GGCATTCGCC GAAGGCTCTG CGAATGACTG GCTGCCGCTA
CTGATGGTAG ACGGACACGG TTTTAGCCCA ACCTCCGGCT CTCTGATCTA CGCCGGTTTC
ACGCTTGGTA TGACCGTTGG CCGCTTTACC GGCGGCTGGT TTATTGACCG CTATAGCCGG
GTGACGGTTG TTCGCGCCAG CGCGTTGATG GGAGCGCTGG GCATTGGCCT GATTATTTTT
GTCGATAGCG ACTGGGTCGC CGGCGTCTCG GTCATTCTTT GGGGCTTAGG CGCTTCGCTC
GGCTTCCCGC TGACCATTTC CGCCGCCAGC GATACCGGTC CCGACGCGCC GACGCGCGTG
AGCGTTGTCG CCACGACCGG CTATCTGGCG TTTTTGGTCG GGCCGCCGCT GTTGGGCTAT
CTGGGAGAGC ATTATGGATT ACGCAGCGCC ATGATGGTTG TGCTGGCGCT GGTTATTCTG
GCGGCGCTGG TGGCGAAGGC CGTCGCCAAA CCTGTATCGA CTCCGCAACC GGTGATGGAG
CATAACGCAT GA
 
Protein sequence
MTVLSSRNAL KRRTWALFMF FFLPGLLMAS WATRTPAIRD ILSVSTAEMG AVLFGLSIGS 
MSGILCSAWL VKRFGTRKVI RTTMTCAVTG MVILSVALWC ASPLIFALGL AVFGASFGAA
EVAINVEGAA VERELNKTVL PMMHGFYSFG TLAGAGVGMA LTALSVPANI HIILAAAVAI
APIFIAIRAI PDGTGKNASE DAHLQEKGLP FYRDIQLLLI GVVVLAMAFA EGSANDWLPL
LMVDGHGFSP TSGSLIYAGF TLGMTVGRFT GGWFIDRYSR VTVVRASALM GALGIGLIIF
VDSDWVAGVS VILWGLGASL GFPLTISAAS DTGPDAPTRV SVVATTGYLA FLVGPPLLGY
LGEHYGLRSA MMVVLALVIL AALVAKAVAK PVSTPQPVME HNA