| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B0850 |
|---|
| Symbol | |
|---|
| ID | 6795642 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | - |
|---|
| Start bp | 843272 |
|---|
| End bp | 844378 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642775127 |
|---|
| Product | ABC-2 type transporter, permease protein |
|---|
| Protein accession | YP_002145770 |
|---|
| Protein GI | 197249266 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCATC GTTTATGGAC GTTAATTCGC AAAGAACTGC AATCGCTTTT ACGCGAACCG
CAAACGCGCG CGATCCTGAT TCTGCCGGTG CTGATTCAGG TCATCCTGTT TCCGTTCGCC
GCGACGCTTG AAGTCACTAA CGCGACTATC GCCATCTATA ACGAAGATAA CGGCAAACAT
TCGGTAGAAC TTACCCAGCG CTTTGCCCGC GCGAAAGCGT TTACCCATGT GCTATTGCTG
AACAGTCCGC AGGAGATCCA GCCGACTATC GATACGCAAA AAGCGCTGCT GCTGGTGCGC
TTCCCGGCGG ATTTCTCGCG GAATCTGGAT ACCTTCCAGC CTGCGCCGAT GCAACTCATT
CTTGATGGAC GTAACTCCAA CAGCGCGCAA ATCGCCGCCA ATTATCTGCA ACAGATCGTC
AAGGAGTATC AGCAGACATT GATGGACGGC AAGCCAAAGC CCAACAATAG CGAACTGGTG
GTACGCAACT GGTATAACCC GAATCTGGAC TACAAGTGGT TTGTGGTGCC CTCGCTGATC
GCCATGATCA CCACTATTGG CGTGATGATC GTCACTTCGC TGTCCGTCGC CCGCGAGCGT
GAACAAGGCA CTCTGGATCA GCTGCTGGTC TCTCCGCTCA CCACCTGGCA GATTTTCGTT
GGTAAAGCGG TGCCGGCGCT GATTGTCGCG ACCTTCCAGG CCACGATCGT GCTGGCTATC
GGCATTTGGG CATACCAAAT TCCCTTCGCC GGTTCGTTAG CGCTGTTTTA TTTCACGATG
GTGATTTACG GGCTGTCGCT GGTAGGCTTT GGCTTGCTGA TATCATCGCT TTGCGCCACG
CAACAGCAGG CGTTTATCGG CGTCTTTGTC TTTATGATGC CGGCGATTTT GCTCTCGGGT
TATGTCTCGC CAGTGGAAAA TATGCCGGTC TGGCTGCAAA ACCTGACGTG GATAAATCCT
ATCCGCCACT TTACTGATAT TACCAAGCAA ATTTATCTTA AGGATGCGAG TCTGGGAATT
GTCTGGGGAA GTTTGTGGCC GCTACTGGTG ATAGCGGCCA CCACGGGTTC AGCGGCGTAT
GCGATGTTTA GACGCAAAGT GATGTAG
|
|---|
| Protein sequence | MFHRLWTLIR KELQSLLREP QTRAILILPV LIQVILFPFA ATLEVTNATI AIYNEDNGKH
SVELTQRFAR AKAFTHVLLL NSPQEIQPTI DTQKALLLVR FPADFSRNLD TFQPAPMQLI
LDGRNSNSAQ IAANYLQQIV KEYQQTLMDG KPKPNNSELV VRNWYNPNLD YKWFVVPSLI
AMITTIGVMI VTSLSVARER EQGTLDQLLV SPLTTWQIFV GKAVPALIVA TFQATIVLAI
GIWAYQIPFA GSLALFYFTM VIYGLSLVGF GLLISSLCAT QQQAFIGVFV FMMPAILLSG
YVSPVENMPV WLQNLTWINP IRHFTDITKQ IYLKDASLGI VWGSLWPLLV IAATTGSAAY
AMFRRKVM
|
|---|
| |