Gene SeAg_B0782 details

Gene Information

• Locus tag: SeAg_B0782
• Symbol: tolR
• ID: 6795507
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Agona str. SL483
• Kingdom: Bacteria
• Replicon accession: NC_011149
• Strand: +
• Start bp: 778111
• End bp: 778539
• Gene Length: 429 bp
• Protein Length: 142 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 642775059
• Product: colicin uptake protein TolR
• Protein accession: YP_002145707
• Protein GI: 197248942
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0848] Biopolymer transport protein
• TIGRFAM ID: [TIGR02801] TolR protein

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.0000000000604041
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCAGAA CGCGTGGACG AGGTCGTCGC GAACTTAAGT CCGAAATCAA TATTGTACCG 
CTACTCGACG TACTGTTGGT GTTGCTGCTG ATCTTTATGG CAACCGCGCC GATCATTACC 
CAGAGCGTGG AGGTCGACTT GCCGGAGGCG AATCAGTCGC AGGCGGTCAG TAGTAACGAC 
GATCCACCGG TCATTATTGA GGTTTCCGGA GTAGGGCAAT ACAGCGTAGT GGTTGATAAA 
GATCGAATGG ATCAACTGCC GTCTGAACAG GTGATCGCAG AAGTAAAGCG TCATCTGCAG 
GCTAATCCGA AAACAGTCTT TTTAATCGGC GGCGCGAAAG AGGTGCCGTA CGATGAAATA 
ATTAAAGCGC TGAACTTGTT ACACAGCGCG GGCGTAAAAT CGGTTGGCTT AATGACGCAG 
CCAATCTGA 

 

Protein sequence

MARTRGRGRR ELKSEINIVP LLDVLLVLLL IFMATAPIIT QSVEVDLPEA NQSQAVSSND 
DPPVIIEVSG VGQYSVVVDK DRMDQLPSEQ VIAEVKRHLQ ANPKTVFLIG GAKEVPYDEI 
IKALNLLHSA GVKSVGLMTQ PI