Gene SeAg_B0695 details

Gene Information

• Locus tag: SeAg_B0695
• ID: 6794789
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Agona str. SL483
• Kingdom: Bacteria
• Replicon accession: NC_011149
• Strand: +
• Start bp: 689825
• End bp: 691753
• Gene Length: 1929 bp
• Protein Length: 642 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 642774973
• Product: putative sigma-54 dependent transcriptional regulator
• Protein accession: YP_002145628
• Protein GI: 197249477
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAAGA CGAAAGATAT AGCCGCATCT CCTCTCTGTT TTGTTTCTCC TTATCCGCAA 
CTGGCAAAGG CTGCCGAGGC GCTGGTCGCG CAGTTGGATT ACGCCGTCAC TATTCATCAA 
ACGACGCTTA ATCGTATCCT GGATGAGCTA CCTTTATTAG AGTCCCGTGG GCACCAGGTA 
CTGATTAGTC GTGGCGGCTG TGCGGAAATA TTAAAAAAGC ACAGTAAATT ACCGGTAGTC 
GAAATTAAAA TGTCCGGCTA CGACATTCTT GATGCGCTTA TCCCTTTTAA AGGACAAAAA 
GGCACTGTCG GTATTGTCGG CTTTTCCAGT GTGATCAAAG GATGCGCGCG CGTAGCGGAA 
CAGTTAAATA TTAACTATAA AATTTTTACC TTACAGGGAA ATGATAAAGA AACGATTTCT 
TGCCTGAAGC GGCAATTAGC GTCCACGCCA TTAGATTGCA TTGTTGGCGA TACCGTTTGT 
CAGGATTATT TTTCACCGCT GGGCTCGCAA TTCCGTTTAC TTGATTCCAG CCCCGCCTCA 
ATAACCGAAG CTCTGGAAGA AGCCCGCTCA TTATATCTGG CTTTTCGCAG CCAATTACTG 
GAGCGCCATC ATCTGCAGCT GATTCTCGAT CAGTTTGATA AAGCTGTTAT CACGCTTGAT 
GATACCGGCG CGTTACTGCA TTATAATAAA TATGCGAGCC AACTTTTTAA AATTAACGCC 
TCCGGTGAAA TTTATGACGC ATCTTTCCTG AAACAGGTAT TGCACCAGGA GCGGCATACA 
TTACGCGAGG GAAAAACCGT CAGCGCGAAA GTCGTCGATA CGCCGCAAGG CGCGATGGTG 
GTTAATCTGT ATCCGGTATT TGCGGCCAGA CAGTTAAGCC GGGTAGTGTT GACGATGCAA 
ACCGTCTCCA GTTTACAGGG GGCGGAACAT CATGTTCGCC GCCAGGAACT GTCTCGCCGT 
GGCTTGAGCG CCCGCTATCA TTTCGACGAT CTGCTTACCG AAAACCCGGA AATGCTGCGT 
CGTCTGGCGA TCATTAAAAA TTATGCCGGT ACGGACGCGA CTATCTTAAT TAATGGCGAA 
AGCGGGACGG GAAAAGAGGT GCTGGCGCAA AGTATTCATA ATGCCAGCCA ACGCGTCAAC 
GGCCCGTTTG TCGCCATTAA CTGCGGCGCG ATGGCCCCTC AGATTCTGGA GAGCGAACTC 
TTTGGCTATG TCGCCGGCGC ATTTACCGGC GCGTCGCCGA AAGGCAAAAT AGGCCTGTTT 
GAATTAGCGC ACCACGGTAC CATTTTTCTG GATGAGATTA GCGAACTGGA TAAACCGCTA 
CAGACGCGCT TATTACGGGT ATTGCAGGAG CGGCAGATTA TGCGGCTGGG CTCGGACCAG 
ATGATACCTG TTGATATTCG CGTGATTGCG GCGACCAATC AGACGTTAAC GAAGCTCATT 
GCGGACGGGA CATTTCGCGA AGATCTTTAC TATCGGCTTA ACGTATTAAA AGTGACCACC 
ATCCCGCTAC GCAAACGTCC GGAGGATATC AAAGCCATCG GCCTGTCGCT GCTTACTAGT 
TTCAGCCAGC ATTATAAACG CCCGGCACTA ACGTTAACCC CGGCGCTGTG GCAAGAGCTT 
CAGCGCTTCG CCTGGCCCGG AAACGTCAGG CAGTTAAGCA ATATTATCGA ACGGCTGGTG 
CTCTCTATTG ATCACTCCCC GGCAACGCTG GATGAGGGTC GCCTCTTGCT GGACGATCTG 
GAAGAGGGGA GCCGACGCGA GCCAACTACC TGCCACGACT GCCAGATGCT GGCTGGCGAT 
TATAAAACGA TTCGCCTGCG TATTTTGAGA AAATTATTAG AGGCGGAAAG GGATAATAAA 
TCGTTAGTGG CGAAACGGTT AAATGTCGAT CGTACCTCGC TGACGCGCTG GATACGTGAG 
TCGGCCTGA 

 

Protein sequence

MNKTKDIAAS PLCFVSPYPQ LAKAAEALVA QLDYAVTIHQ TTLNRILDEL PLLESRGHQV 
LISRGGCAEI LKKHSKLPVV EIKMSGYDIL DALIPFKGQK GTVGIVGFSS VIKGCARVAE 
QLNINYKIFT LQGNDKETIS CLKRQLASTP LDCIVGDTVC QDYFSPLGSQ FRLLDSSPAS 
ITEALEEARS LYLAFRSQLL ERHHLQLILD QFDKAVITLD DTGALLHYNK YASQLFKINA 
SGEIYDASFL KQVLHQERHT LREGKTVSAK VVDTPQGAMV VNLYPVFAAR QLSRVVLTMQ 
TVSSLQGAEH HVRRQELSRR GLSARYHFDD LLTENPEMLR RLAIIKNYAG TDATILINGE 
SGTGKEVLAQ SIHNASQRVN GPFVAINCGA MAPQILESEL FGYVAGAFTG ASPKGKIGLF 
ELAHHGTIFL DEISELDKPL QTRLLRVLQE RQIMRLGSDQ MIPVDIRVIA ATNQTLTKLI 
ADGTFREDLY YRLNVLKVTT IPLRKRPEDI KAIGLSLLTS FSQHYKRPAL TLTPALWQEL 
QRFAWPGNVR QLSNIIERLV LSIDHSPATL DEGRLLLDDL EEGSRREPTT CHDCQMLAGD 
YKTIRLRILR KLLEAERDNK SLVAKRLNVD RTSLTRWIRE SA