Gene SeAg_B0687 details

Gene Information

• Locus tag: SeAg_B0687
• Symbol: cobD
• ID: 6796108
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Agona str. SL483
• Kingdom: Bacteria
• Replicon accession: NC_011149
• Strand: +
• Start bp: 681057
• End bp: 682151
• Gene Length: 1095 bp
• Protein Length: 364 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 642774965
• Product: threonine-phosphate decarboxylase
• Protein accession: YP_002145620
• Protein GI: 197249660
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
• TIGRFAM ID: [TIGR01140] L-threonine-O-3-phosphate decarboxylase; [TIGR01141] histidinol-phosphate aminotransferase

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.00000611427
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGTTAT TCAACAGCGC GCATGGCGGT AATATTCAGG AAGCCGCGAC GGTGTTGGGC 
ATCTCGCCTG ACCAGTTACT GGATTTTAGC GCAAACATTA ATCCGCTGGG TATGCCTGTC 
AGCGTGAAAC GCGCGCTTAT CGACAATCTG GACTGCATTG AGCGCTACCC GGACGCCGAT 
TATTTTCATT TGCACCAGGC GCTGGCGCGT CATCATCAGG TGCCGGCATC GTGGATACTG 
GCGGGAAATG GCGAGACGGA GTCAATCTTT ACCGTGGCGA GCGGTCTTAA ACCACGTCGT 
GCAATGATTG TCACGCCAGG TTTCGCGGAG TATGGCCGGG CGCTGGCGCA AAGTGGCTGT 
GAAATTCGTC GCTGGTCTCT ACGCGAAGCG GATGGCTGGC AGCTTACCGA TGCCATTCTT 
GAGGCGTTGA CGCCCGATCT GGACTGCCTG TTTCTGTGTA CGCCCAATAA TCCTACCGGC 
CTGCTGCCGG AGCGGCCGTT ATTACAGGCC ATTGCCGTAC GCTGCAAATC GCTGAATATT 
AACCTGATCC TGGATGAAGC GTTTATCGAT TTTATTCCGC ATGAGGCGGG CTTTATTCCT 
GCTCTTAAAG ATAATCCGCA TATCTGGGTG CTGCGTTCGC TGACCAAATT TTATGCCATT 
CCCGGCCTGC GGTTGGGATA TCTCGTCAAC AGCGATGACG CGGCGGTAGC GCGGATGCGT 
CGCCAACAAA TGCCGTGGTC GGTTAACGCG CTGGCGGCGC TGGCCGGTGA GGTAGCGTTA 
CAGGATAGCG CCTGGCAACA GGCGACCTGG CATTGGTTAC GGGAGGAGGG CGCCCGGTTT 
TATCAGGCGC TTTGTCAGCT CCCCCTGCTG ACGGTCTATC CCGGGCGGGC AAACTATCTG 
TTGTTACGCT GTGAGCGAGA GGATATTGAC CTGCAGCGGC GGTTGCTGAC GCAGCGGATT 
TTAATTCGTA GCTGCGCTAA CTACCCGGGG CTGGACAGCC GCTATTATCG TGTGGCGATA 
CGCAGCGCTG CGCAAAACGA GCGTCTGCTG TCGGCGCTGC GCAATGTGCT TACCGGTATA 
ACCCCTGCTG ATTGA 

 

Protein sequence

MALFNSAHGG NIQEAATVLG ISPDQLLDFS ANINPLGMPV SVKRALIDNL DCIERYPDAD 
YFHLHQALAR HHQVPASWIL AGNGETESIF TVASGLKPRR AMIVTPGFAE YGRALAQSGC 
EIRRWSLREA DGWQLTDAIL EALTPDLDCL FLCTPNNPTG LLPERPLLQA IAVRCKSLNI 
NLILDEAFID FIPHEAGFIP ALKDNPHIWV LRSLTKFYAI PGLRLGYLVN SDDAAVARMR 
RQQMPWSVNA LAALAGEVAL QDSAWQQATW HWLREEGARF YQALCQLPLL TVYPGRANYL 
LLRCEREDID LQRRLLTQRI LIRSCANYPG LDSRYYRVAI RSAAQNERLL SALRNVLTGI 
TPAD