| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B0683 |
|---|
| Symbol | |
|---|
| ID | 6796506 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | - |
|---|
| Start bp | 679236 |
|---|
| End bp | 679703 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642774961 |
|---|
| Product | rRNA large subunit methyltransferase |
|---|
| Protein accession | YP_002145616 |
|---|
| Protein GI | 197247704 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1576] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000000000302367 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCTGC AACTTGTCGC TGTCGGCACG AAGATGCCCG ACTGGGTTCA AACGGGATTT
ACGGAATATC TGCGTCGTTT TCCGAAAGAT ATGCCCTTTG AGCTGATCGA AATCCCTGCG
GGCAAACGCG GCAAGAACGC GGATATCAAA CGCATTCTCG ACAAAGAGGG CGAGCAGATG
CTGGCCGCCG CCGGTAAGAA TCGCATTGTT ACCCTGGATA TTCCAGGCAA GCCGTGGGAT
ACGCCGCAGT TAGCCAATGA GCTGGAGCGC TGGAAACAGG ACGGGCGCGA CGTCAGTTTG
CTGATTGGCG GCCCGGAAGG ATTATCTCCC GCCTGCAAAG CGGCAGCGGA ACAGAGCTGG
TCGCTCTCGG CGTTAACGCT CCCTCACCCG CTGGTTCGGG TTCTGGTCGC GGAGAGTTTG
TACCGGGCGT GGAGCATCAC AACCAACCAC CCTTATCACC GTGAGTGA
|
|---|
| Protein sequence | MKLQLVAVGT KMPDWVQTGF TEYLRRFPKD MPFELIEIPA GKRGKNADIK RILDKEGEQM
LAAAGKNRIV TLDIPGKPWD TPQLANELER WKQDGRDVSL LIGGPEGLSP ACKAAAEQSW
SLSALTLPHP LVRVLVAESL YRAWSITTNH PYHRE
|
|---|
| |