Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B0564 |
Symbol | gcl |
ID | 6794591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | + |
Start bp | 560330 |
End bp | 562111 |
Gene Length | 1782 bp |
Protein Length | 593 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642774845 |
Product | glyoxylate carboligase |
Protein accession | YP_002145501 |
Protein GI | 197251234 |
COG category | [R] General function prediction only |
COG ID | [COG3960] Glyoxylate carboligase |
TIGRFAM ID | [TIGR01504] glyoxylate carboligase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAA TGAGAGCCGT GGATGCGGCA ATGTATGTGC TGGAAAAAGA AGGTATCACC ACAGCATTCG GCGTTCCTGG GGCTGCAATC AACCCCTTCT ATTCTGCAAT GCGTAAGCAT GGAGGCATTC GCCATATACT GGCGCGTCAT GTGGAAGGCG CTTCGCATAT GGCTGAGGGC TACACACGTG CGGCGGCAGG TAATATTGGG GTCTGCCTGG GCACTTCCGG CCCGGCGGGA ACCGACATGA TCACCGCGCT CTATTCCGCT TCTGCCGACT CTATCCCGAT TTTATGCATT ACCGGTCAGG CGCCACGAGC GCGTCTGCAC AAGGAAGACT TCCAGGCAGT CGATATTGAA GCGATTGCAA AACCAGTCAG CAAGATGGCA GTGACGGTTC GTGAGGCGGC GCTGGTGCCG CGCGTATTAC AACAGGCTTT TCATCTGATG CGCTCAGGCC GCCCAGGTCC TGTGCTGGTT GATTTACCGT TTGATGTCCA GGTTGCGGAG ATCGAATTCG ATCCGGATAT GTATGAGCCG TTGCCGGTAT ATAAGCCAGC CGCCAGCCGC GTACAGATTG AAAAGGCGCT GGAGATGCTG ATTCAGTCCG AGCGTCCGGT AATTGTCGCG GGCGGCGGGG TTATTAACGC CGACGCCGCG CCACTGCTGC AGCAGTTTGC CGAACTGACC AGCGTACCGG TGATCCCTAC TCTGATGGGC TGGGGCTGTA TCCCGGACGA TCACCCCTTA ATGGCGGGGA TGGTCGGCCT GCAAACGGCG CATCGCTACG GCAACGCCAC TCTGCTGGCA TCCGATATGG TTTTTGGCAT CGGTAACCGT TTCGCCAACC GTCATACGGG GTCCGTTGAG AAATATACTC AGGGGCGAAA AATCATCCAT ATCGATATTG AACCGACGCA AATTGGCCGC GTGTTGTGCC CGGATCTGGG CATCGTTTCT GACGCCAAAG CGGCGCTAAC GTTGCTGATC GATGTCGCGC AGGAGATGCA AAAAGCGGGG CGTTTGCCAT GCCGGAAAAC CTGGGTGGAC GAATGCCAGC AGCGTAAACG GACTTTGCTG CGTAAAACCC ACTTTGACAA CGTGCCAGTG AAGCCGCAGC GCGTCTATGA AGAGATGAAC AAAGCCTTTG GTCGCGATGT GTGCTATGTC ACCACCATTG GATTGTCGCA AATCGCGGCA GCGCAGATGC TGCATGTGTT TAAAGACAGA CACTGGATCA ACTGCGGCCA GGCGGGGCCT CTTGGCTGGA CAATCCCGGC GGCATTAGGG GTTTGTGCTG CCGATCCGCA ACGCAATGTG GTGGCGATTT CCGGCGATTT CGACTTCCAG TTCCTGATTG AAGAGTTAGC CGTCGGCGCG CAGTTTAACA TTCCGTATAT CCATGTGCTG GTTAACAACG CTTATCTTGG TCTGATTCGC CAGTCGCAAC GCGCATTTGA CATGGACTAC TGCGTGCAGC TCGCCTTTGA AAATATCAAC TCCAGCGAAG TGAATGGCTA TGGCGTTGAC CATGTAAAAG TGGCGGAAGG GTTAGGCTGT AAAGCAATTC GTGTCTTTAA ACCGGAAGAT ATTGCGCCTG CATTTGAACA AGCCAAAGCG CTAATGGCGC AATATCGCGT TCCGGTGGTG GTGGAAGTCA TTCTGGAACG CGTAACCAAT ATTTCCATGG GCAGCGAACT GGATAACGTA ACCGAGTTTG AAGAGGTTGC GGATAGTGCG AAAGATGCGC CAACAGAAAC CTGTTTTATG AAATATGAGT AA
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Protein sequence | MAKMRAVDAA MYVLEKEGIT TAFGVPGAAI NPFYSAMRKH GGIRHILARH VEGASHMAEG YTRAAAGNIG VCLGTSGPAG TDMITALYSA SADSIPILCI TGQAPRARLH KEDFQAVDIE AIAKPVSKMA VTVREAALVP RVLQQAFHLM RSGRPGPVLV DLPFDVQVAE IEFDPDMYEP LPVYKPAASR VQIEKALEML IQSERPVIVA GGGVINADAA PLLQQFAELT SVPVIPTLMG WGCIPDDHPL MAGMVGLQTA HRYGNATLLA SDMVFGIGNR FANRHTGSVE KYTQGRKIIH IDIEPTQIGR VLCPDLGIVS DAKAALTLLI DVAQEMQKAG RLPCRKTWVD ECQQRKRTLL RKTHFDNVPV KPQRVYEEMN KAFGRDVCYV TTIGLSQIAA AQMLHVFKDR HWINCGQAGP LGWTIPAALG VCAADPQRNV VAISGDFDFQ FLIEELAVGA QFNIPYIHVL VNNAYLGLIR QSQRAFDMDY CVQLAFENIN SSEVNGYGVD HVKVAEGLGC KAIRVFKPED IAPAFEQAKA LMAQYRVPVV VEVILERVTN ISMGSELDNV TEFEEVADSA KDAPTETCFM KYE
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