| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B0477 |
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| Symbol | |
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| ID | 6793498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011149 |
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| Strand | + |
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| Start bp | 473323 |
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| End bp | 474813 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 642774763 |
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| Product | tetratricopeptide repeat protein |
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| Protein accession | YP_002145419 |
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| Protein GI | 197251704 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.486757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAAAC AGAAATGGAA TCTTTTGCTT CTGCTTGGGC TTTCTTTCGC ATCGGTATGC
CAGGCAGGTG ATGATATTGA CGCGTTGTAT AGCCGTATTG CGCAGAAAGA TATTCAGGCG
CTAAATGAGC TAAAAGCGTT AGCCAAAGAT AATAACGCCC AAGCGCTGGC GGAGTTGGGG
TTTATTTATG AGTACGGTGT TTCAGTATCT GTGGATATTC CGCAAGCAAT AAAGTACTAC
GAGCAGGCTT GTGATTTGGA CGGTGATTAT GGTTGCTTTA ATGCGGCTTA TTTCTATGAA
TATGGCATCG GTACCCAAAA GGATATTACG CAAGCGAAAA TATTAGCAAA ACAGCTTAGA
GAAAAAACTA ATTTATCCAA TATCAATCTC GATAAAAAGG TGAGTGAACG TATAATTGGG
AGTGTTTATA GTAATAAACT TGAGGCATAT AGAGACCTTT CATTTCGTCC TCATTTTATT
CAAGGCTTAA GTTTCTATTT TTATGCCCCG CAATCAGATG AGCGAAAACT GCTGAGTCGA
ATAGGTTTTG ACTCATCACA TCTTGCGCGG ATCGCGATAC TCTGGGCGAG AGAGGGTGAT
CCTGAGGTCG CGTATCAGAC GGCAAAACTG GTCTCTACTT TGTATTTTAA TAATGAAACG
AAAACGATAG ATATTGCTGA AGCGCTGAAA TGGCTCCGAA TTTCGGCCGA GAAGGGGGAT
GCCGACTCAC AGACGCTGTT AGGTTTTCTT TATGAACACG CCGGATTGGG ATTACAACCA
GATGGAGAGA AAGCCCGGAA ATGGTATGAA ATGGCGGCGC AGCAAGGTAA TGGAGAAGCA
TTGTATACGT TAGGTCGTAT GTACTATTCT GGCGTAATGG TTAACGTTGA TTACGATAAA
GCGCTGTATT TTTTTAAAAA AGCTTATGAG AAAGAATTAC AGGCGGCCGC TGATTATTTA
GCACAGATGT ATTTTAATGG CCAGAGTGTA GATGTCGATT GCCAACAATC CTGGCACTAT
TACGATAACA GCTATATAAA AAAGATGACA CAACGCGATT ATCTTGATTA TTGTGAAAAA
GATCGAAAGC GCCGTAATGA TTTTAGTCAG CAACTTCCTG AGTTAACATT AGAAAAATAT
GCGGGATTAT TTGGCAGGAT TGATAATATT CCTCTGTGTC AGATTGGATT TGTTGTCAAT
ACGAATAAGT TAATTCATGT TGCGAACTTA CGTGTGGAAT TGATATTAAA AAATGATGTT
GGAGTTAGCG ACGAAAGAAT GGTCGCTTTT CCTCCTTTGG GTCTCAATAC TCTGGGTGCT
GAACAGGGTA TGGGGGATTC TTTTAAGTCG ATGGGATATA TCTTGATGAA AAACGGTGAC
TTGTGTGATT ACCATAAACT TACTTTCACC GTGAAGTCAG CGACGGCAAC AATCAATGGT
AAAAAAGTTG ATTTACTGAA AACGGATAAT TTACATATTA TTCAGAATTG A
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| Protein sequence | MIKQKWNLLL LLGLSFASVC QAGDDIDALY SRIAQKDIQA LNELKALAKD NNAQALAELG
FIYEYGVSVS VDIPQAIKYY EQACDLDGDY GCFNAAYFYE YGIGTQKDIT QAKILAKQLR
EKTNLSNINL DKKVSERIIG SVYSNKLEAY RDLSFRPHFI QGLSFYFYAP QSDERKLLSR
IGFDSSHLAR IAILWAREGD PEVAYQTAKL VSTLYFNNET KTIDIAEALK WLRISAEKGD
ADSQTLLGFL YEHAGLGLQP DGEKARKWYE MAAQQGNGEA LYTLGRMYYS GVMVNVDYDK
ALYFFKKAYE KELQAAADYL AQMYFNGQSV DVDCQQSWHY YDNSYIKKMT QRDYLDYCEK
DRKRRNDFSQ QLPELTLEKY AGLFGRIDNI PLCQIGFVVN TNKLIHVANL RVELILKNDV
GVSDERMVAF PPLGLNTLGA EQGMGDSFKS MGYILMKNGD LCDYHKLTFT VKSATATING
KKVDLLKTDN LHIIQN
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