Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B0462 |
Symbol | ispA |
ID | 6796312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | - |
Start bp | 458051 |
End bp | 458950 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642774749 |
Product | geranyltranstransferase |
Protein accession | YP_002145405 |
Protein GI | 197248755 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACTTTA CGCAGCAGCT ACAGGCTTGC GTAACGCAAG CGAATCAGGC GCTGAGCCGT TTTATCGCGC CACTGCCCTT TCAGAACACT CCCGTGGTCG AAGCCATGCA GTATGGCGCA TTATTAGGCG GTAAACGCCT GCGGCCATTT CTGGTTTACG CCACCGGTCA AATGTTTGGC GTCAGTACGG CAACGCTGGA TGCGCCAGCT GCGGCGGTCG AATGCATTCA TGCCTATTCG CTGATCCATG ACGACCTGCC AGCAATGGAC GATGACGATT TGCGTCGCGG CCTGCCGACT TGCCATATTA AATTTGGCGA AGCCAACGCA ATCCTGGCGG GAGACGCGTT GCAAACACTG GCGTTTGCCA TTATCAGCGA CGCGCCGATG CCGGAAGTCG CCGATCGCGA TCGTATCGCG ATGATCGCCG AACTGGCAAA CGCCAGCGGT ATCGCCGGTA TGTGCGGCGG TCAGGCATTG GATCTGGCGG CAGAAGGCCA GCGGATCACT CTGGACGCGC TGGAACGCAT TCATCGCCAT AAGACCGGCG CGCTCATTCG CGCCGCCGTT AGACTTGGCG CGTTGAGCGC GGGCGATAAA GGACGGAATA CTCTGCCGAT ACTTGACCGC TATGCAGAGA GTATCGGCCT TGCCTTCCAG GTTCAGGATG ACATTCTGGA TGTGGTGGGC GATACTGCAA CGTTAGGTAA ACGTCAGGGC GCAGACCAGC AGCTTGGCAA AAGTACCTAC CCTGCACTTC TGGGTCTTGA GCAAGCCCGG AATAAAGCCC GGGACCTGAT AGAGGACGCC CGTCAGTCGT TACATCAGCT GGCCGCGCAA TCACTGGACA CCTCGGCACT GGAAGCGCTA GCGAACTACA TAATCCAGCG TGATAAATAA
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Protein sequence | MDFTQQLQAC VTQANQALSR FIAPLPFQNT PVVEAMQYGA LLGGKRLRPF LVYATGQMFG VSTATLDAPA AAVECIHAYS LIHDDLPAMD DDDLRRGLPT CHIKFGEANA ILAGDALQTL AFAIISDAPM PEVADRDRIA MIAELANASG IAGMCGGQAL DLAAEGQRIT LDALERIHRH KTGALIRAAV RLGALSAGDK GRNTLPILDR YAESIGLAFQ VQDDILDVVG DTATLGKRQG ADQQLGKSTY PALLGLEQAR NKARDLIEDA RQSLHQLAAQ SLDTSALEAL ANYIIQRDK
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