Gene SeAg_B0455 details

Gene Information

• Locus tag: SeAg_B0455
• Symbol: ribD
• ID: 6794050
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Agona str. SL483
• Kingdom: Bacteria
• Replicon accession: NC_011149
• Strand: +
• Start bp: 451373
• End bp: 452476
• Gene Length: 1104 bp
• Protein Length: 367 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 642774742
• Product: bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase
• Protein accession: YP_002145398
• Protein GI: 197248845
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0117] Pyrimidine deaminase; [COG1985] Pyrimidine reductase, riboflavin biosynthesis
• TIGRFAM ID: [TIGR00227] riboflavin-specific deaminase C-terminal domain; [TIGR00326] riboflavin biosynthesis protein RibD

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.692485
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGGATG AGTTTTACAT GGCGCGAGCG CTAAAACTGG CGCAGCGTGG ACGTTTCACC 
ACTCACCCGA ACCCTAATGT CGGCTGTGTC ATTGTTAACA ATGGCGACAT CGTCGGCGAA 
GGTTATCACC AGCGCGCCGG AGACCCGCAC GCCGAGGTTC ATGCGCTGCG GATGGCGGGC 
GCAAAAGCCA AAGGCGCAAC CGCCTATGTC ACGCTTGAAC CCTGTAGCCA TCATGGGCGA 
ACGCCGCCAT GTTGCGATGC GCTGATTGCG GCCGGCGTCG CGCGCGTGGT CGCCGCGATG 
CAGGACCCGA ACCCACAGGT CGCCGGGCGC GGGCTGTATC GCCTGCAACA GGCGGGTATT 
GCGGTCAGCC ACGGGTTAAT GATGAGTGAA GCGGAGGCGC TCAATAAAGG CTTCCTCAAG 
CGGATGCGTA CCGGATTCCC TTATCTTCAG CTTAAACTGG GCACCTCCGT GGATGGACGG 
ACGGCGATGG CCAGCGGCGA AAGCCAGTGG ATCACCTCGC CGCAGGCCCG GCGCGACGTT 
CAGCGCTTGC GTGCGCAAAG TCACGCTATC TTAACCAGTA GCGCGACGGT ATTGGCTGAC 
GATCCGGCCT TGACGGTGCG TTGGGCGGAG TTAGATGCCT CTACGCAGGC GTCTTACCCG 
CAGGAAAATC TGCGCCAGCC GGTGCGAATT GTTATCGACA GCCAAAACCG GGTAACGCCT 
GCGCATCGTA TTGTGCAGCA GCCTGGCGAA ACGTGGATTG CGCGTACCCA GGAAGATAGC 
CGCGCGTGGC CCGATGCGGT TCGTACTATC AGCGTGCCGG CGCACAACGG ACATTTGGAT 
CTGGTTGTAC TAATGATGCA GTTAGGCAGG CAGCAGATTA ATAGCATATG GGTTGAAGCC 
GGACCGGGAC TGGCAGGCGC GTTGTTGCAA GCCGGGCTGG TGGATGAACT GATTGTCTAT 
GTCGCGCCTA AATTGTTGGG AACCCAGGCG CGGGGATTAT GCGAATTGCC GGGGCTTGAG 
AAGCTCGCCG ACGCGCCGCA ATTTACCTTC AGCGAAATAC GTCATGTCGG CCCGGATGTT 
TGCCTGCATA TGGTGAGCGC ATGA 

 

Protein sequence

MQDEFYMARA LKLAQRGRFT THPNPNVGCV IVNNGDIVGE GYHQRAGDPH AEVHALRMAG 
AKAKGATAYV TLEPCSHHGR TPPCCDALIA AGVARVVAAM QDPNPQVAGR GLYRLQQAGI 
AVSHGLMMSE AEALNKGFLK RMRTGFPYLQ LKLGTSVDGR TAMASGESQW ITSPQARRDV 
QRLRAQSHAI LTSSATVLAD DPALTVRWAE LDASTQASYP QENLRQPVRI VIDSQNRVTP 
AHRIVQQPGE TWIARTQEDS RAWPDAVRTI SVPAHNGHLD LVVLMMQLGR QQINSIWVEA 
GPGLAGALLQ AGLVDELIVY VAPKLLGTQA RGLCELPGLE KLADAPQFTF SEIRHVGPDV 
CLHMVSA