Gene SeAg_B0446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B0446 
SymbolsecD 
ID6795563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand
Start bp445166 
End bp447013 
Gene Length1848 bp 
Protein Length615 aa 
Translation table11 
GC content55% 
IMG OID642774734 
Productpreprotein translocase subunit SecD 
Protein accessionYP_002145390 
Protein GI197247540 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0342] Preprotein translocase subunit SecD 
TIGRFAM ID[TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR01129] protein-export membrane protein SecD 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTAAACC GTTATCCTTT GTGGAAGTAC ATCATGCTGG TCGTCGTAAT TATCGTCGGC 
CTGCTTTACG CACTTCCCAA CCTGTATGGT GAGGATCCGG CTGTTCAAAT CACTGGCGTG
CGCGGCGTCG CCGCCAGTGA GCAAACGCTG ATCCAGGTCC AGAAAACGTT ACAAGAAGAA
AAAATTCCCG CTAAGTCTGT GGCACTGGAA GAGGGCGCTA TTCTTGCGCG CTTCGACACC
ACCGATACCC AGCTACGCGC CCGTGAAGCG CTGATGAGCG TGCTGGGGGA TAAATATGTC
GTGGCGCTTA ACCTTGCGCC GGCTACGCCG CGCTGGTTGG CGGCTATTCA CGCCGATCCG
ATGAAGCTCG GTCTTGATCT GCGCGGCGGC GTTCACTTCC TGATGGAAGT GGATATGGAT
ACCGCGTTAG GTAAACTCCA GGAACAAAAT ATCGATAGTC TGCGCAGCGA TCTGCGTGAA
AAAGGCATTC CTTATACCAC CGTTCGTAAA GAAAATAATT ATGGGCTGAG CATCACGTTC
CGTGACAGCA AAGCGCGTGA TGAGGCGATC GCCTATCTGA CGCCGCGTCA TCGTGACCTG
GTGATTTCCA GCCAGGGCGG TAATCAACTT CGCGCGGTAA TGACCGATGC GCGCCTGAGC
GAAGCGCGCG AATACGCCGT TCAGCAGAAC ATTAATATTC TGCGTAACCG TGTTAACCAA
CTGGGCGTCG CGGAGCCTGT CGTACAACGC CAGGGCGCAG ACCGTATTGT GGTTGAGCTG
CCGGGTATCC AGGATACCGC TCGCGCGAAA GAAATTCTCG GCGCGACCGC GACGCTGGAA
TTCCGTCTGG TGAATACCAA CGTTGACCAG GCCGCCGCTG CTGCCGGGCG CGTACCGGGT
GATTCCGAAG TGAAACAGAC CCGCGAAGGC CAGCCGGTGG TATTGTACAA ACGCGTGATC
CTCACGGGCG ACCATATCAC CGACTCGACG TCCAGCCAGG ATGAATATAA CCAACCGCAG
GTTAACATCT CGCTGGATAG CGCAGGCGGC AATATCATGT CTAACTTCAC TAAGGACAAT
ATCGGCAAAC CGATGGCGAC CCTGTTTGTG GAGTATAAAG ACAGTGGTAA GAAAGACGCT
AACGGTCGCG CCGTACTGGT GAAACAGGAA GAGGTGATTA ACATTGCCAA CATCCAGTCT
CGGCTGGGTA ACAGCTTCCG TATTACTGGT ATCAGCAACC CGAACGAAGC GCGTCAGCTC
TCGTTGCTGC TGCGTGCGGG CGCCCTGATT GCGCCGATTC AGATCGTTGA AGAGCGCACC
ATTGGCCCGA CTCTGGGTAT GCAGAACATC AAGCAGGGCC TGGAAGCCTG TCTGGCCGGT
CTGGTGGTCT CCATCCTGTT CATGATCTTC TTCTATAAGA AGTTTGGTCT GATTGCGACC
AGCGCGTTAG TGGCTAACCT GGTGTTGATT GTCGGTATCA TGTCGCTGTT GCCGGGGGCA
ACGCTCAGTA TGCCGGGGAT TGCGGGTATC GTGTTAACCC TTGCGGTGGC GGTCGACGCC
AACGTTCTGA TTAACGAACG TATCAAAGAA GAGTTGAGTA ATGGCCGCAC GGTACAGCAG
GCGATAAACG AAGGCTATGC TGGCGCGTTC AGTTCCATCT TCGATGCGAA CATCACGACG
CTGATTAAAG TCATCATTCT GTATGCTGTC GGTACCGGGG CAATTAAAGG GTTCGCGATT
ACGACCGGTA TCGGTGTGGC GACGTCGATG TTTACCGCGA TTATCGGTAC GCGTGCTATC
GTAAACCTGC TATATGGCGG CAAGCGCGTC ACTAAGCTGT CAATCTGA
 
Protein sequence
MLNRYPLWKY IMLVVVIIVG LLYALPNLYG EDPAVQITGV RGVAASEQTL IQVQKTLQEE 
KIPAKSVALE EGAILARFDT TDTQLRAREA LMSVLGDKYV VALNLAPATP RWLAAIHADP
MKLGLDLRGG VHFLMEVDMD TALGKLQEQN IDSLRSDLRE KGIPYTTVRK ENNYGLSITF
RDSKARDEAI AYLTPRHRDL VISSQGGNQL RAVMTDARLS EAREYAVQQN INILRNRVNQ
LGVAEPVVQR QGADRIVVEL PGIQDTARAK EILGATATLE FRLVNTNVDQ AAAAAGRVPG
DSEVKQTREG QPVVLYKRVI LTGDHITDST SSQDEYNQPQ VNISLDSAGG NIMSNFTKDN
IGKPMATLFV EYKDSGKKDA NGRAVLVKQE EVINIANIQS RLGNSFRITG ISNPNEARQL
SLLLRAGALI APIQIVEERT IGPTLGMQNI KQGLEACLAG LVVSILFMIF FYKKFGLIAT
SALVANLVLI VGIMSLLPGA TLSMPGIAGI VLTLAVAVDA NVLINERIKE ELSNGRTVQQ
AINEGYAGAF SSIFDANITT LIKVIILYAV GTGAIKGFAI TTGIGVATSM FTAIIGTRAI
VNLLYGGKRV TKLSI