| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B0431 |
|---|
| Symbol | |
|---|
| ID | 6794710 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | - |
|---|
| Start bp | 427730 |
|---|
| End bp | 428902 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642774719 |
|---|
| Product | MFS transport protein AraJ |
|---|
| Protein accession | YP_002145375 |
|---|
| Protein GI | 197248102 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG TTATTTTTTC TTTGGCGCTG GGTACGTTCG GACTGGGGAT GGCCGAGTTT
GGCATTATGG GCGTGCTGAC GGAGCTGGCA CGCGATGTCG GGATAACGAT TCCCGCCGCC
GGGCATATGA TCTCGTTTTA CGCCTTCGGC GTCGTGCTGG GCGCGCCTGT TATGGCGCTC
TTTTCCAGCC GCTTTTCGCT TAAACATATA CTGCTGTTTC TGGTCACGCT GTGCGTGATG
GGCAATGCCA TATTTACCTT TTCCTCGTCA TATCTGATGC TCGCCGTCGG CAGACTGGTT
TCCGGCTTTC CGCACGGCGC CTTTTTTGGC GTCGGCGCCA TTGTCCTGTC AAAGATTATC
CGCCCCGGGA AAGTCACCGC CGCCGTCGCG GGTATGGTTT CAGGAATGAC GGTGGCGAAT
CTGGTGGGCA TTCCGGTCGG CACTTACCTG AGCCAGGAAT TTAGCTGGCG CTACACCTTT
TTATTGATCG CGGTTTTCAA CATCGCTGTG CTCACCGCAA TTTTCTTCTG GGTGCCGGAT
ATCCGTGACA AAGCCCAAGG CAGTCTGCGC GAGCAGTTCC ACTTCTTGCG TAGTCCTGCG
CCGTGGCTCA TTTTCGCCGC CACGATGTTC GGCAATGCGG GCGTTTTTGC CTGGTTCAGC
TATATCAAGC CATTTATGAT GTACATCTCC GGTTTTTCGG AGACGAGCAT GACGTTTATT
ATGATGCTGG TCGGGCTGGG GATGGTGTTA GGCAATCTGT TAAGCGGCAA ACTCTCCGGC
AGATATACTC CGCTGCGCAT CGCGGTAGTG ACTGACCTCG TTATCGTGCT CTCTCTCATG
GCGCTCTTTT TCTTCAGCGG ATACAAAACG GCATCGCTGA CTTTCGCGTT TATCTGCTGC
GCTGGTCTGT TTGCGCTCTC TGCGCCGCTG CAAATCCTGC TGCTGCAAAA CGCCAAAGGC
GGCGAACTGC TGGGCGCGGC GGGAGGGCAA ATCGCCTTTA ATCTCGGTAG CGCGATTGGC
GCCTGGTGCG GCGGGCTGAT GCTGACGCTA GGTTTTGCGT ACCACTACGT GGCGCTTCCC
GCCGCCCTGC TCTCGTTTTC CGCCATGTCG TCGTTGCTGG TATACGGACG TCTAAAACAC
AAGCAGCCAT CGGTCACGCC GGTTGCCGGA TGA
|
|---|
| Protein sequence | MKKVIFSLAL GTFGLGMAEF GIMGVLTELA RDVGITIPAA GHMISFYAFG VVLGAPVMAL
FSSRFSLKHI LLFLVTLCVM GNAIFTFSSS YLMLAVGRLV SGFPHGAFFG VGAIVLSKII
RPGKVTAAVA GMVSGMTVAN LVGIPVGTYL SQEFSWRYTF LLIAVFNIAV LTAIFFWVPD
IRDKAQGSLR EQFHFLRSPA PWLIFAATMF GNAGVFAWFS YIKPFMMYIS GFSETSMTFI
MMLVGLGMVL GNLLSGKLSG RYTPLRIAVV TDLVIVLSLM ALFFFSGYKT ASLTFAFICC
AGLFALSAPL QILLLQNAKG GELLGAAGGQ IAFNLGSAIG AWCGGLMLTL GFAYHYVALP
AALLSFSAMS SLLVYGRLKH KQPSVTPVAG
|
|---|
| |