Gene SeAg_B0403 details

Gene Information

• Locus tag: SeAg_B0403
• Symbol: prpC
• ID: 6795755
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Agona str. SL483
• Kingdom: Bacteria
• Replicon accession: NC_011149
• Strand: +
• Start bp: 401785
• End bp: 402954
• Gene Length: 1170 bp
• Protein Length: 389 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 642774692
• Product: methylcitrate synthase
• Protein accession: YP_002145348
• Protein GI: 197250290
• COG category: [C] Energy production and conversion
• COG ID: [COG0372] Citrate synthase
• TIGRFAM ID: [TIGR01800] 2-methylcitrate synthase/citrate synthase II

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGACA CGACGATCCT GCAAAACAAC ACGCATGTCA TTAAGCCTAA AAAATCGGTC 
GCGCTTTCCG GCGTACCTGC CGGAAATACC GCTCTGTGTA CCGTGGGAAA AAGCGGTAAC 
GATCTGCACT ATCGCGGTTA CGACATTCTC GATCTGGCGG AGCACTGCGA ATTTGAAGAA 
GTCGCGCATT TACTGATCCA CGGAAAATTA CCGACCCGCG ACGAGCTGAA CGCGTATAAA 
AGCAAGTTAA AAGCGCTGCG CGGATTACCC GCCAATGTCC GTACCGTTCT GGAAGCGTTA 
CCGGCGGCCT CGCACCCGAT GGACGTGATG CGTACCGGCG TTTCCGCGCT GGGCTGTACC 
CTGCCGGAAA AAGAGGGACA TACCGTCTCC GGCGCGCGCG ATATTGCCGA TAAGCTGTTG 
GCCTCGCTCA GCTCTATCCT TCTTTACTGG TATCACTACA GCCACAACGG CGAACGTATT 
CAGCCGGAAA CCGACGATGA TTCCATCGGC GGCCATTTCC TGCATCTGCT GCATGGTGAA 
AAGCCAACCC AAAGCTGGGA AAAGGCGATG CATATTTCGC TGGTGCTGTA TGCCGAGCAT 
GAGTTCAACG CTTCGACGTT TACCAGCCGG GTGATTGCCG GAACCGGTTC GGATGTCTAC 
TCCGCGATTA TCGGCGCGAT TGGCGCGCTG CGCGGCCCGA AACACGGCGG AGCGAATGAG 
GTGTCGCTGG AAATTCAACA GCGTTATGAA ACACCGGACG AGGCAGAGGC GGATATCCGT 
AAACGCGTGG AAAACAAAGA GGTGGTGATT GGCTTTGGAC ATCCGGTTTA CACCATCGCC 
GACCCGCGCC ATCAGGTGAT CAAACGGGTG GCGAAACAGC TTTCAGAAGA AGGCGGCTCG 
CTGAAGATGT ACCACATCGC TGACCGTCTG GAAACGGTGA TGTGGGAGAC AAAAAAGATG 
TTCCCGAATC TCGACTGGTT TTCGGCGGTC TCCTACAACA TGATGGGCGT CCCTACCGAA 
ATGTTCACCC CGCTGTTTGT CATCGCCCGC GTAACCGGCT GGGCGGCGCA CATTATTGAA 
CAGCGTCAGG ACAACAAGAT TATTCGCCCC TCTGCCAACT ATACCGGGCC GGAAGATCGT 
CCGTTTGTCT CGATAGACGA TCGTTGCTAA 

 

Protein sequence

MTDTTILQNN THVIKPKKSV ALSGVPAGNT ALCTVGKSGN DLHYRGYDIL DLAEHCEFEE 
VAHLLIHGKL PTRDELNAYK SKLKALRGLP ANVRTVLEAL PAASHPMDVM RTGVSALGCT 
LPEKEGHTVS GARDIADKLL ASLSSILLYW YHYSHNGERI QPETDDDSIG GHFLHLLHGE 
KPTQSWEKAM HISLVLYAEH EFNASTFTSR VIAGTGSDVY SAIIGAIGAL RGPKHGGANE 
VSLEIQQRYE TPDEAEADIR KRVENKEVVI GFGHPVYTIA DPRHQVIKRV AKQLSEEGGS 
LKMYHIADRL ETVMWETKKM FPNLDWFSAV SYNMMGVPTE MFTPLFVIAR VTGWAAHIIE 
QRQDNKIIRP SANYTGPEDR PFVSIDDRC