Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B0401 |
Symbol | prpR |
ID | 6793343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | - |
Start bp | 398884 |
End bp | 400509 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642774690 |
Product | propionate catabolism operon regulatory protein PrpR |
Protein accession | YP_002145346 |
Protein GI | 197251644 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1221] Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain |
TIGRFAM ID | [TIGR02329] propionate catabolism operon regulatory protein PrpR |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGACTG CTCACAGCGC TCCGCGCGAT AATAGCGATA AACCGGTGAT CTGGACGGTC TCCGTAACGC GTCTGTTCGA ACTGTTTCGG GATATCAGCC TGGAATTCGA TCATCTGGCG ACCATCACGC CTATTCAACT CGGCTTTGAA AAGGCGGTGA CCTACATTCG CAAAAAACTG GCGACCGAGC GCTGCGACGC GATTATCGCG GCGGGTTCGA ATGGGGCCTA TTTAAAAAGT CGCCTGTCAA TACCGGTGAT CCTCATCAAG CCCAGCGGAT TCGATGTATT ACAGGCGCTG GCGAAAGCGG GAAAGCTCAC CTCGTCTATC GGTATCGTGA CCTATCAGGA GACCATTCCG GCTTTACTTG CCTTTCAGAA AACGTTTCAC CTCTGTCTTG AACAGCGAAG CTATGTCACC GAAGAGGACG CGCGCGGGCA AATTAACGAA CTTAAGGCCA ACGGTATTGA GGCCGTCGTC GGCGCGGGAT TAATTACCGA TCTGGCGGAA GAAGCGGGAA TGACCGCCAT CTTTATTTAT TCCGCGGCGA CCGTTCGTCA GGCTTTTCAT GATGCGCTGG ATATGACCCG TCTGACACGG CGCCAGCGCG TGGATTACCC ATCCGGCAAG GGATTACAAA CCCGGTATGA ACTGGGCGAT ATACGCGGCC AGTCGCCGCA AATGGAGCAG CTCCGCCAGA CGATTACGCT CTATGCCCGC TCCCGTGCGG CAGTGCTGAT TCAGGGGGAA ACAGGGACCG GAAAAGAGCT GGCGGCGCAG GCGATTCACC AGACGTTTTT TCACCGCCAG CCTCACCGTC AGAATAAGCC ATCCCCTCCC TTTGTCGCCG TCAATTGCGG CGCGATTACC GAGTCGTTGC TGGAAGCGGA ACTGTTTGGT TATGAAGAGG GCGCGTTTAC CGGTTCACGA CGAGGAGGCC GGGCGGGGCT ATTTGAAATC GCACACGGCG GCACGCTGTT TCTGGATGAA ATCGGCGAAA TGCCCTTGCC GTTACAAACC CGACTCTTGC GCGTACTGGA GGAAAAAGCC GTCACTCGCG TCGGCGGACA CCAGCCGATC CCGGTGGAGG TCCGGGTGAT CAGCGCTACG CATTGCGATC TGGATCGGGA GATAATGCAA GGACGTTTTC GCCCCGATCT CTTTTACCGC CTGAGTATTC TGCGTCTGAC GCTTCCTCCT TTGCGCGAGC GGCAGGCTGA TATTTTGCCG CTGGCGGAAA GCTTTTTAAA ACAGTCGCTG GCGGCGATGG AAATTCCGTT TACCGAATCG ATACGTCATG GATTGACACA GTGTCAGCCG CTTTTGCTGG CCTGGCGCTG GCCCGGTAAT ATTCGCGAAC TGCGTAATAT GATGGAGCGC CTGGCGCTTT TTTTAAGCGT CGATCCCGCG CCAACGCTGG ACAGGCAATT TATGCGGCAG TTATTACCTG AGCTTATGGT GAACACAGCA GAACTGACGC CTTCAACCGT GGATGCGCAC ACGTTACAGG ATGTACTGGC GCGCTTTAAG GGCGATAAGA GCGCCACGGC GCGTTATCTG GGGATTAGCC GCACCACTCT GTGGCGTCGT TTAAAAGCAG GTGCCAAAGA CCAGTCGGGT AATTAA
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Protein sequence | MTTAHSAPRD NSDKPVIWTV SVTRLFELFR DISLEFDHLA TITPIQLGFE KAVTYIRKKL ATERCDAIIA AGSNGAYLKS RLSIPVILIK PSGFDVLQAL AKAGKLTSSI GIVTYQETIP ALLAFQKTFH LCLEQRSYVT EEDARGQINE LKANGIEAVV GAGLITDLAE EAGMTAIFIY SAATVRQAFH DALDMTRLTR RQRVDYPSGK GLQTRYELGD IRGQSPQMEQ LRQTITLYAR SRAAVLIQGE TGTGKELAAQ AIHQTFFHRQ PHRQNKPSPP FVAVNCGAIT ESLLEAELFG YEEGAFTGSR RGGRAGLFEI AHGGTLFLDE IGEMPLPLQT RLLRVLEEKA VTRVGGHQPI PVEVRVISAT HCDLDREIMQ GRFRPDLFYR LSILRLTLPP LRERQADILP LAESFLKQSL AAMEIPFTES IRHGLTQCQP LLLAWRWPGN IRELRNMMER LALFLSVDPA PTLDRQFMRQ LLPELMVNTA ELTPSTVDAH TLQDVLARFK GDKSATARYL GISRTTLWRR LKAGAKDQSG N
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