| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B0398 |
|---|
| Symbol | |
|---|
| ID | 6793868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | + |
|---|
| Start bp | 395472 |
|---|
| End bp | 397568 |
|---|
| Gene Length | 2097 bp |
|---|
| Protein Length | 698 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642774687 |
|---|
| Product | ferrichrome-iron receptor |
|---|
| Protein accession | YP_002145343 |
|---|
| Protein GI | 197251193 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
|---|
| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCATGT TTGCGACAAC GCGTATGGCG CTATTGATAG GCGGAGCTAT CGGCGGCGCG
ACTTTTCCTC TTTTTGCCCA GGAAACCACA AAAAATGATA CCGTCATTGT CACCTCGCCC
GTTCAGAGTG GCGCGACTAA GCTGGCGACG CCAGATATTG AAACGCCGCA GTCGGTATCC
ATTATTACCC GCCAGCAGTT TGAAGAGCAG GGCGCAACCA GCGTGCGTCA GGCGGTCAGC
TACACCCCAG GCGTATACAG TAACCAGATA GGCGCCTCTA ACCGCTTTGA TTACATCGTA
TTGCGTGGTT TTTCGGACGG TAGTCTGGAT AACGTCTATC TCGACGGGTT AAAAATGATG
GGCGACACCA ATTCGCACAG TTCGTTGGTG GTTGACCCCT GGTTTCTGGA AGATATCGAG
GTGGTACGCG GCCCGGCGTC CGTTCTGTAT GGACGTTCAT CGCCAGGCGG CATTGTCGCG
CTGACGTCGC GAAAACCGGC GTTTGATGCC GGAGGAGAAG TGAAGCTGTT TGCCGGCAAT
AACAACCAGC GCGGGGCGGC TTTTGATGTG ACCGGCCCAC TGGATGACAA TGAACGTGTG
GCGGCGCGTC TTAGCGGCAT GACACGTTAC GCCGATTCGC AGTTTACCCC CTTGAAAGAG
GAACGTTATG CGCTGATGCC GAGCCTGACC TGGCGAATTA CCGATCGGAC GCGTCTTGAT
CTTATGGCCT ATCTGCACCG TGATCCGCAA GGCGGTAGCC ACTCCGGACT GCCTTATCAA
GGCACGGTTG TACCTTATAA CGGCAGAAAA ATTTCTAACA CTTTCTTTGA AGGTGAAGAT
GACTACGACA AATACGATCG CCGTGAAAAT ATGGTGGGTT ATAACATTGA GCATCTGTTC
GATAACGGCT GGTCGGTACG GCAAAAATTG CGCTATTTGC ATACCAAAGT GACGTTGAAT
CAGGTCTATG CCGCAGGTTG GTTGAATGAA ACGGCGCTGA ATCGCGGCTA TTCCGGCTCC
GGGGAGAAAA TGTCGGCTAT CGCGCTGGAT AATCAGCTCG ACGGCAGCGT GGATACCGGG
GCGATTAATC ATCGTCTGCT GGTGGGGATC GATTATCAGG ATCGCAGTAA TCATACTACT
GGCTATTATG GCGCGTTTCC GCCGATTGAC GCTTTCAACC CTGTTTATGG CGCTCAGCCG
GATTACATTA CGTTGTATAG CCGTGAAAAA CATAAGCTGC GGCAGACCGG ATACTATTTA
CAGGATCAGA TGTCATGGGA TCGCTGGCGC TTTACGTTGG GCGGTCGTTA CGATCGGGTC
AGCGTGTCTA ACATCGACAA ACTTCATGAT TCACGCAGCG ATCTCGATAA AAACAACGTC
AGCACCCGTG CTGCGTTGCT TTATCTGTTC GACAATGGCG TCGCCCCCTA TCTCAGTTAT
TCTACCGCGT TTACGCCGAC CAGCTTCGCC GACGAAAACG GCAATGTGCT GGAACCGATG
AAAGGCAAGC AGTGGGAGGC GGGGGTAAAA TACGAACCGC TGGGGGGGAA CAGCCAGTTT
AGCGCCGCCG TGTATCGTAT TAACCAAACC AATATCGCGA CCAAAGAAGA ACCTACCGAT
CCGTACCGCT CGATTGGTGA AATTGAGTCT AAAGGGGTTG AACTGGAGGC CATTAGCCAT
TTGTCGGATA GCGTCCGTTT GCAGGCGGCG TATACCTATA CTGATATCCG TTATAAGAAA
AGTAGCCCGC AAGAGCAGGG TAAGCGCGCG GTTTATGCTC CACGGAACCA GGCCAGCGCC
TGGCTAAGCT ACGATGTGAA AAGCGGTCTG TTAGAGGGGC TGACTTTGGG CTCCGGCATC
CGGTACGTCA ACGGCGTGAC CAGCGATCGC CTGAATACCC ACACGTTGCC GTCCTATACA
CTGGTCGACA TGGTAGTTGG GTATGATTTA TCCAGCATTG GGTTAAATGG CTTGAGCGCC
CAGCTCAACG TAAATAACCT GACGGACAAA CGCTATGTCG CTGCCTGTAA TTCGCTCTCT
TATTGTTATT TTGGCGCCGA GCGTAGCATT GTAGGCAGCG TGTCATGGGC GTTTTGA
|
|---|
| Protein sequence | MFMFATTRMA LLIGGAIGGA TFPLFAQETT KNDTVIVTSP VQSGATKLAT PDIETPQSVS
IITRQQFEEQ GATSVRQAVS YTPGVYSNQI GASNRFDYIV LRGFSDGSLD NVYLDGLKMM
GDTNSHSSLV VDPWFLEDIE VVRGPASVLY GRSSPGGIVA LTSRKPAFDA GGEVKLFAGN
NNQRGAAFDV TGPLDDNERV AARLSGMTRY ADSQFTPLKE ERYALMPSLT WRITDRTRLD
LMAYLHRDPQ GGSHSGLPYQ GTVVPYNGRK ISNTFFEGED DYDKYDRREN MVGYNIEHLF
DNGWSVRQKL RYLHTKVTLN QVYAAGWLNE TALNRGYSGS GEKMSAIALD NQLDGSVDTG
AINHRLLVGI DYQDRSNHTT GYYGAFPPID AFNPVYGAQP DYITLYSREK HKLRQTGYYL
QDQMSWDRWR FTLGGRYDRV SVSNIDKLHD SRSDLDKNNV STRAALLYLF DNGVAPYLSY
STAFTPTSFA DENGNVLEPM KGKQWEAGVK YEPLGGNSQF SAAVYRINQT NIATKEEPTD
PYRSIGEIES KGVELEAISH LSDSVRLQAA YTYTDIRYKK SSPQEQGKRA VYAPRNQASA
WLSYDVKSGL LEGLTLGSGI RYVNGVTSDR LNTHTLPSYT LVDMVVGYDL SSIGLNGLSA
QLNVNNLTDK RYVAACNSLS YCYFGAERSI VGSVSWAF
|
|---|
| |