| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B0300 |
|---|
| Symbol | |
|---|
| ID | 6796889 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | - |
|---|
| Start bp | 305526 |
|---|
| End bp | 306440 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642774598 |
|---|
| Product | LysR substrate binding domain protein |
|---|
| Protein accession | YP_002145256 |
|---|
| Protein GI | 197251911 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCCA CCTCCGAAGA ACTCGCAATT TTTGTCGCTG TCGTGGAAAG CGGCAGCTTC
AGCCGGGCGG CAGAGCAGCT TGGACAGGCC AATTCCGCTG TCAGCCGGGC AGTTAAAAAG
CTGGAGATGA AGCTCGGCGT CAGTCTGCTT AATCGTACGA CCCGACAGCT GAGCCTGACT
GAAGAAGGAG AGCGATACTT CAGGCGCGTG CAGCAGATAC TGCAAGAAAT GGCCGCCGCA
GAAACGGAAA TCATGGAGTC GCGTAATACC CCGCGCGGCT TACTGCGTAT CGATGCGGCA
ACGCCGGTAA TGCTGCATTT CCTGATGCCG CTGATTAAAC CTTTTCGTGA ACGGTATCCG
GAAATAACGT TGTCTCTTGT CTCCTCAGAA ACGTTCATCA ATCTTATTGA ACGAAAAGTG
GATGTTGCGA TACGCGCAGG CACGTTGACA GATTCAAGTC TGCGCGCGCG TCCGTTATTT
ACCAGTTATC GTAAGATTAT CGCCTCACCG GATTATATTG CCCGTTTTGG CAAGCCAGAG
ACCGTTGAAG AGTTAAAACG GCATCTGTGC CTGGGGTTCT CAGAACCTGT TTCGCTCAAT
ACCTGGCCGA TTGCCTGTAG CGACGGGCAG CTCCATGAGA TCAAATGTGG GATTTCTTCC
AATAGCGGGG AAACGTTAAA ACAACTTTGC CTGAACGGTA ACGGCATTGC ATGTCTTTCA
GATTATATGA TTGATAAAGA GATCGCGTGG GGAGAACTGG TGGAACTGCT GGCCGATAAA
CGTCTGCCGG TAGAAATGCC TTTCAGCGCC GTTTACTACA GCGATCGCGC CGTCAGCACA
CGCATTCGGG CATTTATCGA CTTTTTGAGC GAATATATAA GAACAGCCCC CGCAGGAGCT
GTGAAAGAGG GGTAA
|
|---|
| Protein sequence | MKATSEELAI FVAVVESGSF SRAAEQLGQA NSAVSRAVKK LEMKLGVSLL NRTTRQLSLT
EEGERYFRRV QQILQEMAAA ETEIMESRNT PRGLLRIDAA TPVMLHFLMP LIKPFRERYP
EITLSLVSSE TFINLIERKV DVAIRAGTLT DSSLRARPLF TSYRKIIASP DYIARFGKPE
TVEELKRHLC LGFSEPVSLN TWPIACSDGQ LHEIKCGISS NSGETLKQLC LNGNGIACLS
DYMIDKEIAW GELVELLADK RLPVEMPFSA VYYSDRAVST RIRAFIDFLS EYIRTAPAGA
VKEG
|
|---|
| |