| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B0261 |
|---|
| Symbol | uppS |
|---|
| ID | 6797119 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | + |
|---|
| Start bp | 269102 |
|---|
| End bp | 269860 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642774562 |
|---|
| Product | undecaprenyl pyrophosphate synthase |
|---|
| Protein accession | YP_002145226 |
|---|
| Protein GI | 197248928 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.00664761 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGTCTG CAACTCAACC AGTAAGCGAA AATTTGCCAG CGCATGGCTG CCGTCATGTT
GCAATAATTA TGGATGGCAA TGGTCGCTGG GCGAAAAAGC AAGGGAAGAT CCGGGCCTTT
GGGCATAAAG CCGGGGCGAA GTCCGTCCGG CGAGCGGTCT CTTTTGCTGC CAATAACGGT
ATTGATGCGT TAACGCTGTA TGCCTTTAGT AGTGAAAACT GGAACCGACC GGCGCAGGAA
GTGAGCGCGT TAATGGAGCT GTTTGTGTGG GCGCTGGATA GCGAAGTCAA AAGCCTGCAC
CGCCATAACG TTCGCCTGCG TATTATCGGC GATATCAGTC GATTCAACTC ACGTTTACAA
GAACGTATTC GCAAATCAGA AGCGCTTACC GCCCATAATA CGGGTCTAAC GCTGAATATT
GCTGCGAATT ACGGCGGACG TTGGGATATT GTCCAGGGAG TCCGACAACT GGCGGAACAG
GTGCAGGCTG GAGTGCTGCG CCCCGATCAG ATTGATGAAG AGAGACTAGG CCAGCAAATC
TGTATGCATG AGCTGGCGCC TGTGGATTTA GTAATTAGGA CTGGGGGAGA GCATCGCATT
AGTAACTTTT TGCTTTGGCA AATTGCCTAT GCCGAACTTT ACTTTACGGA TGTTCTTTGG
CCCGATTTCG ATGAACAAGA CTTTGAAGGT GCGCTGCATG CCTTTGCTAA TCGAGAGCGT
CGTTTCGGCG GTACCGAGCC TGGTGATGAC AAAGCCTGA
|
|---|
| Protein sequence | MLSATQPVSE NLPAHGCRHV AIIMDGNGRW AKKQGKIRAF GHKAGAKSVR RAVSFAANNG
IDALTLYAFS SENWNRPAQE VSALMELFVW ALDSEVKSLH RHNVRLRIIG DISRFNSRLQ
ERIRKSEALT AHNTGLTLNI AANYGGRWDI VQGVRQLAEQ VQAGVLRPDQ IDEERLGQQI
CMHELAPVDL VIRTGGEHRI SNFLLWQIAY AELYFTDVLW PDFDEQDFEG ALHAFANRER
RFGGTEPGDD KA
|
|---|
| |