| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B0223 |
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| Symbol | hrpB |
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| ID | 6796368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011149 |
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| Strand | + |
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| Start bp | 226794 |
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| End bp | 229268 |
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| Gene Length | 2475 bp |
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| Protein Length | 824 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642774526 |
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| Product | ATP-dependent RNA helicase HrpB |
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| Protein accession | YP_002145190 |
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| Protein GI | 197247716 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTACAAT GCGGCGCAAA GAAAGTTAAC CCCGTGGAGC CGTTTGTGAC GTCATTGCCC
GTTGCCGCCG TATTGCCTGA ATTGTTGACA GCCCTAAAAA CCGCGCCGCA GGTTTTGTTG
TCCGCGCCTA CCGGGGCGGG GAAATCCACC TGGCTGCCGT TGCAACTCCT GCAACAAGGT
CCGGTTGCTG GAAAAATCCT CCTGCTTGAA CCGCGTCGTC TGGCGGCGCG TAATGTCGCC
CAGCGTCTGG CGGAAGCGTT GAATGAAAAG CCTGGCGAAA CGGTAGGTTA CCGGATGCGC
GCGCAAAGCT GCGTGGGGCC GCGTACCCGG CTGGAAGTGG TGACCGAAGG CGTATTGACC
AGAATGATTC AGCGCGATCC CGAATTACGC GGCGTGGGGC TGGTGATACT GGATGAATTT
CATGAGCGCA GTTTACAGGC GGATTTAGCG TTGGCGCTGT TGCTGGATAT CCAGCAAGGG
CTCCGTGACG ATCTCAGGCT GTTAATCATG TCTGCGACGC TGGATAACGA TAGGCTTTGT
CAGCGACTGC CTGATGCGCC GACGATCGTC TCGGAGGGGC GCGCGTTCCC GGTGGAGCGA
CGTTATCAGC CGCTTGCGGC GCATTTGCGT TTTGATGAAG CCGTCGCGAT GGCGACAGCG
GAACTGCTGC GCAATGAAAA CGGTTCGCTG CTGCTATTTT TACCCGGCGT AGGCGAAATA
CAGCGCGTTC ATGAACATCT GGCGTCGCGG GTAGGGAGCG ATGTCCTGCT TTGTCCGCTG
TATGGCGCAT TGTCTCTGGA AGCGCAACGC AAAGCGATTG TTCCCGCCCC CGCCGGGATG
CGTAAAGTGG TGTTGGCGAC TAACATTGCC GAAACCAGTT TGACGATTGA AGGGATTCGT
CTGGTCGTCG ATAGCGCTCA GGAGCGCGTG GCGCGATTCG ACGCGCGAAC GGGACTGACG
CGGCTGGTTA TGCAGCGTAT CAGTCAGGCG TCAATGACGC AGCGCGCGGG GCGCGCCGGA
CGACTGGCGC CGGGTATCTG TTTACATCTG CTGGCCAAAG AACAGGCGGA GCGGGCGGCG
GCGCAAAGCG ATCCGGAAAT CTTACACAGT GACCTTTCCG GTTTGTTGAT GGAGGTGTTG
CAGTGGGGAT GTCACGATCC GGCATCGCTT TTCTGGCTGG ACAGACCGCC GGAGGTGAAT
CTTCAGGCCG CCCGCCGTTT ATTATTGATG TTAGGCGCGC TGGAGGGCGA GCGGTTAAGC
GCGCGGGGGC GGAAAATGGC GGCAATGGGT AACGATCCGC GCCTGGCGGC GATGTTAGTC
AACGCCGACG AGGGCGACAG CGCCGCCACC GCCGCCATGC TCGCGGCCAT CCTTGAGGAC
CCGCCGCGCG GCGGCGGTAC GGATTTAAGC GTGCTATTTT CGCGGCGACA GCCGGGCTGG
CAGCAGCGTA GCCAGCAGCT TTTAAAACGG CTGCAGGTGC GTAATGGCGA GCCGGATAGC
GCGCTTATTA TGCCGCTGTT GGCCAGAGCG TTTAGCGACC GCATCGCGCG GCGTCGTGGT
CAGGAAGGGC GCTATCAGTT AGCCAATGGT ATGGGCACGA TGTTAGATGC GGATGACGCG
TTGGGACGTC ATGAATGGCT GATCGCGCCG CTGTTGCTGC AAGGTAGCGC CTCGCCGGAC
GCCCGAATAT TGTTGGCGCA GCCGCTGGAT ATTGCCTCGC TGATTCAGGC GTGTCCTGAT
TTACTGCGCC AGTCTGACAC GGTTGAATGG GACGAAGCGC AGGGAACGTT GAAAGCGTGG
CGCAGAATGC GTATTGGACA GTTGACGGTT AGCGTTCAGC CACTGGCGAA ACCGTCTGAA
GAGGAGCTTC ATCAGGCGAT GCTGAACGGC ATCCGCGATA GAGGTCTGGC CGTCCTTAAC
TGGACGCCGG AAGCGGAGCA GTTCCGTCTG CGTCTGCACT GTGCGGCGAA ATGGTTGCCG
GAATATGACT GGCCTGCCGT GGATGAGGCG TCGCTGCTGG CGACTCTGGA AAACTGGTTG
CTGCCGCACA TGACAGGCGT ACAGTCGTTA CGGAGTCTGA AATCTCTGAA TGTGACTCAG
GCGTTACGGG GACTGCTTGA CTATGCCATG CTGCAACGTC TGGATAGTGA ACTGCCTGGG
CATTACACTG TGCCGACGGG AAGCCGAATA ACGATTCGTT ATCATGAAGA TAACCCGCCC
GCACTGGCGG TCAGAATGCA GGAAATGTTT GGCGAAGCGA AGACCCCAAC CATCGCTCAG
GGCCGCGTGT CGCTGGTGCT GGAACTGCTT TCGCCTGCGC AGCGACCGCT ACAGATTACG
CGCGATTTAA GCGCTTTCTG GCAGGGGGCG TATCGCGAAG TGCAAAAAGA GATGAAGGGC
CGTTACCCCA AACATGTCTG GCCGGACGAT CCGGCGAATA CGGCCCCAAC GCGGCGCACG
AAGAAGTATT CGTGA
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| Protein sequence | MLQCGAKKVN PVEPFVTSLP VAAVLPELLT ALKTAPQVLL SAPTGAGKST WLPLQLLQQG
PVAGKILLLE PRRLAARNVA QRLAEALNEK PGETVGYRMR AQSCVGPRTR LEVVTEGVLT
RMIQRDPELR GVGLVILDEF HERSLQADLA LALLLDIQQG LRDDLRLLIM SATLDNDRLC
QRLPDAPTIV SEGRAFPVER RYQPLAAHLR FDEAVAMATA ELLRNENGSL LLFLPGVGEI
QRVHEHLASR VGSDVLLCPL YGALSLEAQR KAIVPAPAGM RKVVLATNIA ETSLTIEGIR
LVVDSAQERV ARFDARTGLT RLVMQRISQA SMTQRAGRAG RLAPGICLHL LAKEQAERAA
AQSDPEILHS DLSGLLMEVL QWGCHDPASL FWLDRPPEVN LQAARRLLLM LGALEGERLS
ARGRKMAAMG NDPRLAAMLV NADEGDSAAT AAMLAAILED PPRGGGTDLS VLFSRRQPGW
QQRSQQLLKR LQVRNGEPDS ALIMPLLARA FSDRIARRRG QEGRYQLANG MGTMLDADDA
LGRHEWLIAP LLLQGSASPD ARILLAQPLD IASLIQACPD LLRQSDTVEW DEAQGTLKAW
RRMRIGQLTV SVQPLAKPSE EELHQAMLNG IRDRGLAVLN WTPEAEQFRL RLHCAAKWLP
EYDWPAVDEA SLLATLENWL LPHMTGVQSL RSLKSLNVTQ ALRGLLDYAM LQRLDSELPG
HYTVPTGSRI TIRYHEDNPP ALAVRMQEMF GEAKTPTIAQ GRVSLVLELL SPAQRPLQIT
RDLSAFWQGA YREVQKEMKG RYPKHVWPDD PANTAPTRRT KKYS
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