| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B0214 |
|---|
| Symbol | panD |
|---|
| ID | 6794844 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | - |
|---|
| Start bp | 219516 |
|---|
| End bp | 219896 |
|---|
| Gene Length | 381 bp |
|---|
| Protein Length | 126 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642774517 |
|---|
| Product | aspartate alpha-decarboxylase |
|---|
| Protein accession | YP_002145181 |
|---|
| Protein GI | 197250616 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0853] Aspartate 1-decarboxylase |
|---|
| TIGRFAM ID | [TIGR00223] L-aspartate-alpha-decarboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.112461 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCGCA CCATGCTGCA AGGCAAGCTC CACCGCGTAA AAGTCACGCA GGCGGACCTG
CACTACGAAG GTTCCTGTGC CATTGACCAG GATTTCCTTG ATGCCTCCGG TATTCTGGAA
AACGAAGCGA TTGATATCTG GAACGTGACC AATGGGAAAC GTTTCTCAAC CTATGCGATT
GCGGCTGAAC GCGGCTCCAG AATCATCTCG GTGAACGGTG CGGCGGCGCA CTGCGCTGAA
GTTGGCGACA TTGTGATTAT CGCCAGCTTC GTCACCATGT CTGATGAAGA AGCGCGTACA
TGGCGTCCGA AAGTGGCCTA TTTTGAAGGC GACAACGAGA TGAAGCGCAC CGCGAAAGCT
ATTCCGGTAC AGGTTGCCTG A
|
|---|
| Protein sequence | MIRTMLQGKL HRVKVTQADL HYEGSCAIDQ DFLDASGILE NEAIDIWNVT NGKRFSTYAI
AAERGSRIIS VNGAAAHCAE VGDIVIIASF VTMSDEEART WRPKVAYFEG DNEMKRTAKA
IPVQVA
|
|---|
| |