| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B0207 |
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| Symbol | |
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| ID | 6795002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011149 |
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| Strand | - |
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| Start bp | 213571 |
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| End bp | 216117 |
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| Gene Length | 2547 bp |
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| Protein Length | 848 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642774510 |
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| Product | outer membrane usher protein FimD |
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| Protein accession | YP_002145174 |
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| Protein GI | 197249470 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAAAA GGCAACACCG GGTATTTTAT TTATCGCGCT GCGCTGTGTG TATCGCGCTG
GGCAGCACGT TCGCACACGT TGCATGGGCG CGCGACTATT TCAATCCGGC ATTTATTGAA
AACCATGGGC AGGCGAGTCG CACAAGCGTC GATCTGTCGA CATTTGATAA CGACAAAAGC
CAGCTGCCTG GCACCTATTA CGTCACTATC AATATCAATA AAACAGAAAT CGGCGCGCGA
AACGTTGATT TTCAACTCAC GACGCTCAGT GACGGTCAAC AGGCATTACA GGGCTGTTTA
CGGCTCCAGG AACTAAAAGA TAACAGCGTC AAAACCGACC TTTTTCCAAC CCTGGAGAGT
GAAAAAGGCT GCGTCGATCT CAGCGTTATC CCCGGCGCCA GCCAGCGGTT TGATTTTCAG
CAACAGACAT TATCAGTAAG CATCCCGCAA CTCTACATCG CCAACAACGC GCGCGGCTAC
GTGCCGCCGG AAAAGTGGCA GGAGGGGATT ACCGCGCTAA TGCTGAACTA CAGTTTCAGC
GGCTATAAAG AGTACGGTTC CAGCGAGGAT TCCGACGATG CGGAATCGAA GTATCTCGCT
CTCCAGCCGG GTTTTAACCT CGGGCCGTGG CGTTTTCGCA ACTACAGTAA CTGGAGTTCA
AATAACGGCG AGAGCGGTAG CTGGAACAGC GTTTATAACT ATTTACAGCG CGACATTATC
GCGCTGAAAA GCCAGTTCAC CGCCGGAGAC AGCAATACGC CATCCGACGT GTTCGACAGC
GTACCTTTTC GCGGCCTCCA GCTTACCTCT GACGATCAAA TGCAGCCCAA CAGCCAGCGT
GGTTACGCCC CGACGATTCG CGGCATCGCC CGCTCAAACG CGCAGGTTAT CGTGCGGCAA
AACGGCTATA TCGCCTATCA AACCGCCGTT TCGCCGGGCG AATTTGAAAT CAACGATATG
TTTCCCACCG GCAGCAACGG CGACTATGAC GTAACGGTAA AAGAAGCCGA CGGCAGCGAA
CAGCATTTTA TCGTGCCCTA CTCTTCGCTG CCGATTCTGC AGCGCACCGG ACGGGCAAAA
TACAGCGTGA CCGTGGGTAA ATACCGCGAT TATAACAACC ACACGCTGGA CGACTTCGGC
CAGGCAACCC TGCTGTACGG CCTGCCGTGG GGCATCACCC TGTACGGCGG CAGCCAGATT
GCCGGCGATA AATACCAGTC CGTCGCCTTC GGCGTCGGGC AAAATATGCA GATGCTGGGG
GCCATTTCCC TGGACGGCAT CTGGTCGCAC GCCAAATTTG ACGATGGCCG CAAAGAAATC
GGGCAATCCT GGCGCGTCCG CTACAGCAAG GGCGTCGTCA GTACGGGCAC CACGTTTTCG
CTGGCCGGCT ATCGTTACGC CAGCGAAAAC TACAATTCGC TGAGCGAGGT GATCAACCCG
GACGACGATT TTTATGATAA CTACGGCAAG CGCCATAATC GTTTCGAAGC CTCGGTCAAC
CAGCAAATTA GCGATACGCT CGGTTCCTTA ACGCTAAGTT GGGTCAAAGA AGATTACTGG
CACAGCGCGC AGCAGATGGA GTCTCTGAGC GCCAGTTACA ACAATAGCTG GGGTCCGGTG
AGCTATTCGC TGAGCTACAG CTATAACAAA AACACCTACC AGTACCGATC GGACAATGAC
GATGATGACA ACGACGACGA TCGTTATAAC CAGAACGATC GGCTGTTCAC GTTGTCGCTG
CACGTTCCGT TTACGGTGTT CGATTCCAGG CTATACGCCA GCTATATGCT GAACACGCGT
AAGCACGATG CCACGGTGAA CAGCACCACC CTTAGCGGCA CCGCGCTGCG TGACAGAAAC
CTGAACTGGT CGTTACAGCA AAGCCACAGC ACACAAGACG GTGATTCCGG CGGGGTAAAC
GCCAGCTATA AAGGCACTTA TGCCAACCTC AACGCCGGTT ACAATCAGTC GCCAGATAGC
CAACAGGTCA GCTACGGCAT CAGCGGCGGC ATTCTGGCGC ACGAAAACGG TATTACCCTG
AGCCAGCCGA TTACCGGCGC GGCGATTTTA ATTAAAGCGC CCGGCGCCAG CGGCGTTTCG
GTTGAAAACC AGACCGGCGT CGCCACCGAC TTCCGGGGTT ATACGGTGAT CCCCAACGTC
ACGCCGTATT ATCGCTACGA TATCTCGCTC GACAGCAGCA CGTTTGCTGA CAACGTGGAT
ATTCCGCTCA ACAACCAGAC CGTCTATCCG ACGCGTAATG CGGTGGTGCG CGCGTCGTAT
GACACGCATA AGGGCTATCG CGTGCTGTTA ACGCTGACGC GCAGCAATGG CGAGCCCGTG
CCCTTTGGCG CGACGGCAAG CGTCGATGGG CAGGATGCGA ACCTGGCCAG TATCGTCGGC
GATAAAGGCC AGGTCTTCCT CAGCGGCCTG CCGGAAGAGG GCCTGCTGCT GGTGAACTGG
GGAAGCGCCT CTTGCCGCGC GGATTACCGC CTTGATATCA GCAAAAATAT GAACGGCATC
GTGATGGCGA ACGCCGTCTG CCAGTGA
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| Protein sequence | MRKRQHRVFY LSRCAVCIAL GSTFAHVAWA RDYFNPAFIE NHGQASRTSV DLSTFDNDKS
QLPGTYYVTI NINKTEIGAR NVDFQLTTLS DGQQALQGCL RLQELKDNSV KTDLFPTLES
EKGCVDLSVI PGASQRFDFQ QQTLSVSIPQ LYIANNARGY VPPEKWQEGI TALMLNYSFS
GYKEYGSSED SDDAESKYLA LQPGFNLGPW RFRNYSNWSS NNGESGSWNS VYNYLQRDII
ALKSQFTAGD SNTPSDVFDS VPFRGLQLTS DDQMQPNSQR GYAPTIRGIA RSNAQVIVRQ
NGYIAYQTAV SPGEFEINDM FPTGSNGDYD VTVKEADGSE QHFIVPYSSL PILQRTGRAK
YSVTVGKYRD YNNHTLDDFG QATLLYGLPW GITLYGGSQI AGDKYQSVAF GVGQNMQMLG
AISLDGIWSH AKFDDGRKEI GQSWRVRYSK GVVSTGTTFS LAGYRYASEN YNSLSEVINP
DDDFYDNYGK RHNRFEASVN QQISDTLGSL TLSWVKEDYW HSAQQMESLS ASYNNSWGPV
SYSLSYSYNK NTYQYRSDND DDDNDDDRYN QNDRLFTLSL HVPFTVFDSR LYASYMLNTR
KHDATVNSTT LSGTALRDRN LNWSLQQSHS TQDGDSGGVN ASYKGTYANL NAGYNQSPDS
QQVSYGISGG ILAHENGITL SQPITGAAIL IKAPGASGVS VENQTGVATD FRGYTVIPNV
TPYYRYDISL DSSTFADNVD IPLNNQTVYP TRNAVVRASY DTHKGYRVLL TLTRSNGEPV
PFGATASVDG QDANLASIVG DKGQVFLSGL PEEGLLLVNW GSASCRADYR LDISKNMNGI
VMANAVCQ
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