Gene SeAg_B0119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B0119 
SymboltbpA 
ID6795837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand- 
Start bp127262 
End bp128245 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content55% 
IMG OID642774428 
Productthiamine transporter substrate binding subunit 
Protein accessionYP_002145092 
Protein GI197250327 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4143] ABC-type thiamine transport system, periplasmic component 
TIGRFAM ID[TIGR01254] ABC transporter periplasmic binding protein, thiB subfamily
[TIGR01276] thiamine ABC transporter, periplasmic binding protein 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTAAAAA AATATCTTCC GCTTTTACTC CTGTGCGCGG CGCCTGCTTT CGCCAAACCC 
GTTCTCACCG TCTATACCTA CGACTCGTTC GCCGCCGACT GGGGGCCAGG CCCGGCGGTG 
AAAAAAGCGT TTGAAGCCGA TTGCAACTGC GAGCTGAAAC TGGTGGCGCT GGAGGATGGC 
GTTTCACTGC TCAACCGCCT GCGGATGGAG GGAAAGAACA GCAAAGCCGA TGTGGTGTTG 
GGGCTGGACA ATAATCTGCT GGAAGCGGCC ACGCAAACTA AACTCTTTGC CAAAAGCGGC 
GTGGCGAATG AGGCGGTCAA GGTGCCCGGC GGCTGGGAAA ACGACACATT TGTGCCGTTC 
GATTACGGCT ATTTCGCTTT TGTCTACGAT AAAAGCAAGC TGAAAAATCC GCCGAAAAGC 
CTGAAAGAAC TGGTCGAGAG CGATCAAAAA TGGCGGGTGA TTTATCAGGA CCCGCGTACC 
AGTACGCCAG GGCTGGGGCT GTTACTGTGG ATGCGCAAAG TCTATGGCGA TAACGCGCCG 
CAGGCCTGGC AAAAACTGGC GGCCAAAACG GTGACGGTGA CGAAAGGCTG GAGCGAGGCC 
TACGGTTTAT TTCTGAAAGG TGAAAGCGAT TTGGTGCTCA GTTACACCAC CTCTCCGGCG 
TATCACATTA TTGAAGAGAA GAAGGACAAT TACGCCGCCG CGAACTTCAG CGAAGGCCAT 
TACTTACAGG TAGAGGTCGC GGCGCGTACC GTCGCCAGCA AGCAGCCGGA ACTGGCGGAG 
AAATTCCTCA AATTTATGGT TTCTCCGGCG TTTCAGAACG CCATACCCAC CGGCAACTGG 
ATGTACCCGG TAGCGGACGT CGCCCTACCA GCAGGGTTTG AATCATTGGC CAAACCCGCC 
ACAACGCTGG AATTCACGCC GCAACAAGTG GCAGCACAAC GCCAGGCATG GATTAGCGAA 
TGGCAACGCG CCGTCAGCCG TTAA
 
Protein sequence
MLKKYLPLLL LCAAPAFAKP VLTVYTYDSF AADWGPGPAV KKAFEADCNC ELKLVALEDG 
VSLLNRLRME GKNSKADVVL GLDNNLLEAA TQTKLFAKSG VANEAVKVPG GWENDTFVPF 
DYGYFAFVYD KSKLKNPPKS LKELVESDQK WRVIYQDPRT STPGLGLLLW MRKVYGDNAP 
QAWQKLAAKT VTVTKGWSEA YGLFLKGESD LVLSYTTSPA YHIIEEKKDN YAAANFSEGH 
YLQVEVAART VASKQPELAE KFLKFMVSPA FQNAIPTGNW MYPVADVALP AGFESLAKPA 
TTLEFTPQQV AAQRQAWISE WQRAVSR