Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B0060 |
Symbol | |
ID | 6795835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | - |
Start bp | 61791 |
End bp | 63449 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642774372 |
Product | sensor kinase DpiB |
Protein accession | YP_002145036 |
Protein GI | 197249131 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3290] Signal transduction histidine kinase regulating citrate/malate metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGAAA ATACCGTAAT TAAATATCTA ACTACCAATA TGTTTATACG GGAAATTACA CACTGGTTTG CCAGACGCTC GTTTCAAAAC CGGATATTTC TACTGATCCT GTTTACATCC ACCATCGTGA TGCTGGCAAT CACTTGGTAT CTGACCGATA TCACGAAAGA ACGCCTGCAT TATCAGGTGG GCCAACGTGC GCTTATTCAG GCAATGCAAA TATCCGCTAT GCCAGAATTA GTTGAAGCCG TAGAGGCGCA TGATTTGTCA CGCATCAAAG CGCTGATTGA CCCAATGCGC TCGTTTTCGG ACGCGACTTA CATTACCGTT GGCAACGAAA AAGGTCAGCG ACTGTATCAC GTCAACCCGG ATGAGATCGG CAAATATATG GAGGGCGGTG ATAGCGACGA CGCGCTGTAT AACGCTAAAA GCTACGTATC GGTGCGCAAA GGTTCATTAG GCTCTTCCTT ACGTGGTAAA TCCCCGATTC AGGACAGTAC CGGTAAAGTC ATCGGTATTG TTTCCGTCGG CTATACTCTG GAACAGTTGG AGAGCTGGCT TAACTTACAA ATCAGCTCGT TGCTGTTCCC GATGGCGTTA CTGCTGCTGG TACTGTTGTA CTGCGCCCGC CGCTTCTCGC TGCATATTAA AAAGCAGATG CTTAACATGG AGCCGCAGCA GCTTTCACAA CTATTAATTC AGCAAAGCGT GTTGTTTGAG TCGGTATTTG AAGGGTTGAT CGCCATTGAC TCCCATCACC GTATTACCGC TATTAACCAA ACGGCTCGCC GCTTACTGAA TCTGAGCCAA CCGGAGTCTG AACTCATTGG CTATGCAATC CACCATGTCG TGTTGCCGGA GGCCTTCTTT TACGATGCGC CGCAAAAAAA CAAAAAAGAT GAGATCGTCA CCTTTAACCA AATGAAAGTC ATCGCCAGTC GCATGGCGGT CATTATTGAC AACCAGCCTC AGGGCTGGGT TATTAGCTTT CGCAACAAAG ACGATATCAA TACACTCAGC CTGCAGTTAA GTCAGGTACG GCAATACGCC GATAACCTGC GCGCCGTGCA GCATGAGCAT CGCAACCTTA TTTCCACCAT TGCCGGACTG CTGTTCCTGA AGCGCTACGA TAATGCGCTG GCGCTGATTC AGCAGCAGTC GGAAAGCCAC CAGAAAGTAC TCGATTTTAT TTCCCATAAT TTCCGCGACC ACCACCTTGC GGGGCTATTA ATCGGTAAAT ATTATCGGGC AAAAGAGCTG GGGCTGGAGC TGATTTTCGA TCCTTCAAGC TTTGTTGAAC ACCTGCCGTC ATCGCTCTCG CATAATGAAT GGATTTCGAT TGTTGGCAAT TTATTGGACA ACGCCTATAA CGCCACCCTG CTCAATAGCG AAGGCTCGCG ACAGATTGAG TGCCTGATCA ATAGCGAAGG TAATGAAGTC ATTATTGAAG TTGCCGATCA GGGATGTGGT ATTGACGAAA ATATCCGCCA GCATATTTTC GAGCGTGGAG TGACCACCCA CAACAACGGC GATCACGGAA TTGGATTATG GTTGGTGCAC AGCTACGTCA AGCAGGCCAA TGGCGACATT ATCGTCGATA ACAATAATCC TTTTGGCACC ATTTTTACCC TCTATATCCC TTTTACCAGA GAAGAATAA
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Protein sequence | MQENTVIKYL TTNMFIREIT HWFARRSFQN RIFLLILFTS TIVMLAITWY LTDITKERLH YQVGQRALIQ AMQISAMPEL VEAVEAHDLS RIKALIDPMR SFSDATYITV GNEKGQRLYH VNPDEIGKYM EGGDSDDALY NAKSYVSVRK GSLGSSLRGK SPIQDSTGKV IGIVSVGYTL EQLESWLNLQ ISSLLFPMAL LLLVLLYCAR RFSLHIKKQM LNMEPQQLSQ LLIQQSVLFE SVFEGLIAID SHHRITAINQ TARRLLNLSQ PESELIGYAI HHVVLPEAFF YDAPQKNKKD EIVTFNQMKV IASRMAVIID NQPQGWVISF RNKDDINTLS LQLSQVRQYA DNLRAVQHEH RNLISTIAGL LFLKRYDNAL ALIQQQSESH QKVLDFISHN FRDHHLAGLL IGKYYRAKEL GLELIFDPSS FVEHLPSSLS HNEWISIVGN LLDNAYNATL LNSEGSRQIE CLINSEGNEV IIEVADQGCG IDENIRQHIF ERGVTTHNNG DHGIGLWLVH SYVKQANGDI IVDNNNPFGT IFTLYIPFTR EE
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