Gene SeAg_B0044 details

Gene Information

• Locus tag: SeAg_B0044
• Symbol: nhaA
• ID: 6793103
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Agona str. SL483
• Kingdom: Bacteria
• Replicon accession: NC_011149
• Strand: +
• Start bp: 46187
• End bp: 47353
• Gene Length: 1167 bp
• Protein Length: 388 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 642774356
• Product: pH-dependent sodium/proton antiporter
• Protein accession: YP_002145020
• Protein GI: 197251902
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG3004] Na+/H+ antiporter
• TIGRFAM ID: [TIGR00773] Na+/H+ antiporter NhaA

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAACATC TGCACCGATT TTTTAGCAGC GATGCCTCTG GGGGCATCAT TCTCATCATC 
GCCGCTGCGC TGGCTATGCT GATGGCCAAT ATGGGCGCGA CCAGTGGATG GTATCATGAT 
TTTCTGGAGA CGCCGGTTCA GCTACGGGTT GGGGCGCTTG AAATCAACAA AAACATGCTG 
CTGTGGATCA ACGATGCGCT GATGGCCGTG TTTTTCCTGT TGATTGGCCT GGAAGTTAAG 
CGCGAACTGA TGCAAGGCTC GTTAGCCAGT CTGCGCCAGG CCGCTTTTCC GGTGATTGCC 
GCCATCGGCG GGATGATTGT ACCGGCATTG CTCTATCTGG CCTTTAACTA CTCCGATCCG 
GTCACTCGCG AGGGCTGGGC TATTCCTGCC GCGACGGATA TCGCCTTTGC GCTGGGCGTG 
CTGGCGCTGT TGGGCAGTCG GGTTCCGCTG GCGCTGAAAA TATTCCTGAT GGCGCTGGCG 
ATCATCGATG ATCTCGGCGC CATCGTTATT ATCGCACTGT TTTATACCAG CGATCTTTCT 
ATCGTCTCGC TGGGCGTGGC GGCGTTCGCG ATTGCCGTGC TGGCGCTGCT GAACCTGTGC 
GGCGTCAGAC GGACAGGGGT ATATATTCTG GTCGGGGCAG TGCTGTGGAC GGCGGTACTG 
AAGTCCGGCG TTCACGCGAC GCTGGCAGGC GTCATTGTCG GCTTCTTTAT TCCGCTGAAA 
GAAAAACACG GTCGCTCGCC GGCCAAGCGT CTGGAGCATG TTCTGCACCC GTGGGTCGCG 
TACCTGATCC TGCCGCTCTT TGCTTTTGCG AATGCCGGCG TTTCTCTTCA GGGCGTCACG 
ATTGACGGTC TGACCTCCAT GCTGCCGTTG GGAATTATTG CCGGTCTGCT GATTGGTAAG 
CCGCTGGGGA TTAGCCTGTT TTGCTGGCTG GCGCTGCGTT TCAAGCTGGC GCATCTGCCG 
CAGGGGACCA CTTATCAGCA AATCATGGCG GTCGGCATTT TGTGTGGCAT TGGCTTTACG 
ATGTCCATCT TTATCGCCAG CCTGGCATTT GGCAATGTCG ATCCGGAACT TATTAACTGG 
GCGAAATTGG GCATTTTGAT TGGTTCATTG CTCTCCGCAG TGGTGGGGTA TAGCTGGTTG 
CGCGCGCGTT TGAACGCGCC GGCATAA 

 

Protein sequence

MKHLHRFFSS DASGGIILII AAALAMLMAN MGATSGWYHD FLETPVQLRV GALEINKNML 
LWINDALMAV FFLLIGLEVK RELMQGSLAS LRQAAFPVIA AIGGMIVPAL LYLAFNYSDP 
VTREGWAIPA ATDIAFALGV LALLGSRVPL ALKIFLMALA IIDDLGAIVI IALFYTSDLS 
IVSLGVAAFA IAVLALLNLC GVRRTGVYIL VGAVLWTAVL KSGVHATLAG VIVGFFIPLK 
EKHGRSPAKR LEHVLHPWVA YLILPLFAFA NAGVSLQGVT IDGLTSMLPL GIIAGLLIGK 
PLGISLFCWL ALRFKLAHLP QGTTYQQIMA VGILCGIGFT MSIFIASLAF GNVDPELINW 
AKLGILIGSL LSAVVGYSWL RARLNAPA