Gene SeAg_B0030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B0030 
Symbol 
ID6792576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand+ 
Start bp30576 
End bp31211 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content56% 
IMG OID642774344 
Productfimbrial chaperone 
Protein accessionYP_002145008 
Protein GI197251411 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3121] P pilus assembly protein, chaperone PapD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.8197 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTAATTG GCGGTACTCG CTTTATCTAT CATGCGGGCG CCCCGGCATT AAGCGTACCG 
GTAAGTAACC ATTCAGAAGC GTCCTGGTTA ATTGATACGC ATATTTTACC TGGTGGCCGC 
TGGCCTGGAA CCAAAAACGA AGGGAATATC ACGCCCTTCG TGGTCACGCC GCCATTATTT 
ATGCTTTCAG CGCGCCAGGA AAACTCAATG CGGGTGGTTT ATACCGGCGG ACCGCTACCC 
GCCGACAGGG AAAGTCTGTT TACCTTGAGT ATCGCCGCCA TTCCCTCCGG TAAACCGGAG 
GCGAACCGTG TACAAATGGC GTTTCGTTCG GCTTTAAAAT TGCTCTATCG CCCTGAGGGA 
CTCGCCGGCA ATCCGCAGCA GGCCTACCGG CATCTGATCT GGTCGCTTAC CCCCGATGGC 
GCGACGGTAC GCAATCCGAC ACCCTATTAC GTTACGCTCT TTTTATTACG CGCTAACGAG 
CGCGCCCAGG ACAACGCCGG GGTCGTGGCT CCCTTTGCAA CGCGTCAAAC GGACTGGTGC 
CGGCACACGG TTCGCTGCAC TGTGCGCTGG CAAAGTATTA ATGACTATGG GCGGGTAATG 
CCAGCGCAAA CCGTGGATCT GACGCGTATT CATTAA
 
Protein sequence
MVIGGTRFIY HAGAPALSVP VSNHSEASWL IDTHILPGGR WPGTKNEGNI TPFVVTPPLF 
MLSARQENSM RVVYTGGPLP ADRESLFTLS IAAIPSGKPE ANRVQMAFRS ALKLLYRPEG 
LAGNPQQAYR HLIWSLTPDG ATVRNPTPYY VTLFLLRANE RAQDNAGVVA PFATRQTDWC 
RHTVRCTVRW QSINDYGRVM PAQTVDLTRI H