Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B0024 |
Symbol | |
ID | 6793876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | + |
Start bp | 24471 |
End bp | 25013 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642774338 |
Product | fimbrial subunit |
Protein accession | YP_002145002 |
Protein GI | 197250118 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3539] P pilus assembly protein, pilin FimA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.585957 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGC CTGTACTAGC ATTAATGGTC TCTGCAATTG CCTTTGGCGG AATGTTGTCC ACCGCGCAAG CGGATACTAC AACCGTCACT GGCGGTACGG TAAATTTTGT CGGACAGGTC GTTGACGCCG CCTGTTCTGT TTCCGCTGAC TCTGTCGATC AGACCGTGAC ATTAGGCCAG GTTCGCGCCA GTAAATTAAC CGAGGCCGGT ATGGTGGCGA ATCAAAAAGA AGATTTCACC ATTAAACTGG AAGACTGCGA TACTCAGACC AGCCAGAATG CGGCGGTGAT TTTTAATGGC CAACAGGACG CAAACCAGCC GGGGTCGCTG GCGAATACCG CTGGGGCAGG TTCGGCGACG AATGTGGCAT TACAACTTTA TGGACCAGAT GGCCAGGCGC TGAATATCGG TGAATCGTCC AGTACTGTTA CCTTGAACGA TGGCGAAAAC GTTATTCCGC TTAGCGTGGA TTATATCGCT ACCGGTACGG CGACTGCCGG TAATGTTACC GCGACGGCGA CATTTAGCAT GGTTTATTCC TGA
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Protein sequence | MKKPVLALMV SAIAFGGMLS TAQADTTTVT GGTVNFVGQV VDAACSVSAD SVDQTVTLGQ VRASKLTEAG MVANQKEDFT IKLEDCDTQT SQNAAVIFNG QQDANQPGSL ANTAGAGSAT NVALQLYGPD GQALNIGESS STVTLNDGEN VIPLSVDYIA TGTATAGNVT ATATFSMVYS
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