Gene SeAg_B0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B0016 
Symbol 
ID6796068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand
Start bp15015 
End bp15962 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content41% 
IMG OID642774330 
Productputative transcriptional regulator, LysR family 
Protein accessionYP_002144994 
Protein GI197251857 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.709055 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGATCGA AAGGTGCCAA CAAGAGCTTT GATTATAATT TAATCAAAAT TCTTGACGCT 
GTTATTTTGT CAGGAAATGC GGCTATGGCG GCAAAAAAGT TAGGCATTAC ACCGGCTGCC
GTTTCTCTGG CGTTAAAGCG CCTGCAGAGT TATTACCCGG AAGAACTGTT TAGCAGAGGG
AAAGGCGGGC TCATCCCCAC AGCTAAGGCT GTCGACATTC ACCAAAATTT CAGTCAGGTG
ATGAAACTGG TGGATGACAC ATTTCTATGT AATAGCAAAA AAGATGAAGC GTTCCAGATA
ACGTTATTAG GCAGTGATAT TGTTGAAAGC TATTATCTTT CTCAGCTCTA TAACAGCGAT
ATATTTGACC GTATTTTGAT AAATCATTTC ACTGTCAGAA ATATGAGTCG GGAGCATATC
AGCGAACTTC TGTTTACTGC GCAAGGCGAT CTGTTGATTA GTGCCGAACC TTTGCTGGAG
TCCGGCATAG AGAATCAAAT TATTGATAGT TTTAAATCAT TTGTTTGTAT CTGTAGCAGT
AAACACATGC TGAGTACCCT CTCACAACTG TCGCTACATC ATTTTTATTC TTCGCGTCAT
GCGTTATATC AGCCGGGGAT GGGGGCTTCA GTGATATATC ATGATAGTGA ATTATTTAAG
GATGAGCTTT ACTATACTGG CAGGCGTATT GTCGGCTATC GCAGTGATTC GCTTAACGGT
TTGATGAGCA TGATCGAACG AACCTCATTG ATTGCATTGA TGCCTTTGAA ATTAGCGCTT
TTTTATAAAA ATCATCGTAA ATATGACATT AAATTTATTC AGCCTCCGCC CGAACTGGCT
TTGAAGTCAG TTCAGGTCTA TGCATCCTGG AATAAAAATA GTAGAAATAT ATCGACGATT
AATGAGATGG TAAGTATGTT ACAAACGCTT TCCTCCTTCC GTCGCTAA
 
Protein sequence
MGSKGANKSF DYNLIKILDA VILSGNAAMA AKKLGITPAA VSLALKRLQS YYPEELFSRG 
KGGLIPTAKA VDIHQNFSQV MKLVDDTFLC NSKKDEAFQI TLLGSDIVES YYLSQLYNSD
IFDRILINHF TVRNMSREHI SELLFTAQGD LLISAEPLLE SGIENQIIDS FKSFVCICSS
KHMLSTLSQL SLHHFYSSRH ALYQPGMGAS VIYHDSELFK DELYYTGRRI VGYRSDSLNG
LMSMIERTSL IALMPLKLAL FYKNHRKYDI KFIQPPPELA LKSVQVYASW NKNSRNISTI
NEMVSMLQTL SSFRR