| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_A0020 |
|---|
| Symbol | |
|---|
| ID | 6792714 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011148 |
|---|
| Strand | - |
|---|
| Start bp | 7793 |
|---|
| End bp | 9973 |
|---|
| Gene Length | 2181 bp |
|---|
| Protein Length | 726 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 642774282 |
|---|
| Product | topoisomerase |
|---|
| Protein accession | YP_002144946 |
|---|
| Protein GI | 197247340 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0550] Topoisomerase IA |
|---|
| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTTAA CTATTGCAGA GAAACCTGAG TTAGCTGAAA TTATTGCTAA AGCGTTCGGC
GGTGAAGTTA AGAAAAGTGG TTATTGGGAA TGCGCAAATA ACAACGTTGT TACTTGGTGT
TATGGTCATA TGCTGGTACT TACACCTCCT GATAAAGTTA ACCCTTCTTA CAAAACATGG
GTTATGTCAG ACTTGCCGAT GGATCTAACC GAAGTTTCCC ATGAAGTTAA AACTACGGAA
AACGGTTATG TAGAGCGGCA ATACAAAATC ATTACTGATT TGCTACGAAA ATCATCATCG
GTTATTAATG CTGGCGATCC CGATGATGAA GGTGAGTTGT TGGTTAGGGA GATTCTTTGG
AAAGAGAATT ATAACAAGCC TGTTCAGCGG TTATTGCTGA ATGACCTGAA CGTTAATGCA
GCCAAAAAAG CTCTTTCAAA ATTGCAGGAC GGTAATTCTG AAAAATTTAT GCGCCTTGCA
CTAAAGGCTT TAGCCAGGGC TAAAGGCGAT CAGATTTATG GTCTTAACAT GACGCGCTAT
TATACGCTTC TAAATCGTCA GCATGGCGGC AATGGTAAGC TTACGTGTGG TAGAGTACAA
ACGCCTATGC TCGGCTTGAT AGTTAAGCGC TATGAAGATT TTAAAAACCA TGTTAAATCT
AATTACTATG ATGTTTATTC CAGTCATAAC ATTTTGAAAT CTGTTTATTT AAAACTTATT
GCTGATGATA AGTTTGCTAC AGATGGAAAA ATATTATCTC CAGAAGTGGC GGAAAACATT
AAATCAGCAT GTGTTATGAA GCCCTCAACT GTGGTTGTTG CGAAAGTGGA GGATAAGCAT
ACGCCACCAC CGCTACCTTT TGACCTGTTA GGGCTTCAAG CCTATATGTT AAAAGATAAC
ATTGATCCAA CTGAAACAAT GGAAATTACT CAAAAGCTAC GCTCTAAAGA GATAGCTGCT
ATTTCCTATA ACCGCTCGGA TTGTCGTTAT CTTACAAGCG ATCAATATGA TGAAGCACCC
GCAACCTTAG AGGCTTTAAA GAAATATATT AGCGGCGGGA TACTTGAATC CGTTATTAAT
AACAACGGAT TCGATATTAA ACGTAAAGGT ATTGCGTTTA ACGATGATAA TGTAAGCGCA
CATACTGGTA TCATTCCTTC GGCAGAACCG CGAAATCTTG ATAAGCTTAC TTCAAAAGAG
AAAAAGGTTT ATGAAGCTAT AGTATTACGC TATCTGCTTC AATTCCTCGA TGATAAAAAA
TACCAATCAG CAAAAGTTAT TATCGAGTGT GAGGGTTATC GCTTTGGTGG GAGCGCAACA
AAACTCGTTA GCCCTGGCTG GACTGCCCTT GAAGCTGAGG ATTCCGATGA TGATAGTGCA
GAGGAAAACA CCGATTCGGC TTTTGATGCT ATCAGCGCTA TGAAAGTAGA TGATGTAGGG
GTTTGTAATG ATGTACGTGT AGATAAGAAA GAAACTAAAC CGCTACCTGT CTACACTATG
AAAACCTTCC TTGAAGATTT GAAACGTGTT AGTCGTTACG TTACCGATCC TCACATTAAA
CAGCTTTTGT TAAGCAAAGA CAAAGGTAAG AAAGGGGAAC GTGGTGGTAT CGGTACGCCA
GCTACGCGAG CAACGATTAT CAGCAATCTC GAAAGTACGG GCTATTTCAC CGTACAGAAC
GGGAAGCTTA TTCCGACTGA GAAAGGTATA GGCTTTATTA AAAACCTCCC TGTGGCGGTT
TCAGCGCCTG ATATGACAGC ATTATGGCAT GAGCAACAAA TGATGATAAT GGAAGGTGAT
CTTGAGTTAG GCGATTTCAT TATTAATATT AACAATACCG TTAAAGAGCT TATGAATCCT
GAGCTTTCAC AAGGTATCGT TTCTGCTGCT CAAAATTTCG CTGATAATAA ACCTGTCGGT
AAATGCTTCT GTTGTTCTTC TGAAATGAAG CTAACACCTA AAGTCTATGC TTGTCAGAAT
GAAGGTTGTG GTTTCAAAAT CTGGCGTAAA ATTTCTGAAA AAGAACTGAC AGACAATCAA
ATGCAATTAC TCATGAACGC TGGCAGGACG AAAGTGATTA AAGGCTTTAA ATCCAAAGCT
GGAAAATCAT TTGAGGCAGC GCTTGTAATT GACAAAGAAC AAAAACGGGT AACTTTTGAG
TTTGCCGCCC GTAAAGCATA A
|
|---|
| Protein sequence | MILTIAEKPE LAEIIAKAFG GEVKKSGYWE CANNNVVTWC YGHMLVLTPP DKVNPSYKTW
VMSDLPMDLT EVSHEVKTTE NGYVERQYKI ITDLLRKSSS VINAGDPDDE GELLVREILW
KENYNKPVQR LLLNDLNVNA AKKALSKLQD GNSEKFMRLA LKALARAKGD QIYGLNMTRY
YTLLNRQHGG NGKLTCGRVQ TPMLGLIVKR YEDFKNHVKS NYYDVYSSHN ILKSVYLKLI
ADDKFATDGK ILSPEVAENI KSACVMKPST VVVAKVEDKH TPPPLPFDLL GLQAYMLKDN
IDPTETMEIT QKLRSKEIAA ISYNRSDCRY LTSDQYDEAP ATLEALKKYI SGGILESVIN
NNGFDIKRKG IAFNDDNVSA HTGIIPSAEP RNLDKLTSKE KKVYEAIVLR YLLQFLDDKK
YQSAKVIIEC EGYRFGGSAT KLVSPGWTAL EAEDSDDDSA EENTDSAFDA ISAMKVDDVG
VCNDVRVDKK ETKPLPVYTM KTFLEDLKRV SRYVTDPHIK QLLLSKDKGK KGERGGIGTP
ATRATIISNL ESTGYFTVQN GKLIPTEKGI GFIKNLPVAV SAPDMTALWH EQQMMIMEGD
LELGDFIINI NNTVKELMNP ELSQGIVSAA QNFADNKPVG KCFCCSSEMK LTPKVYACQN
EGCGFKIWRK ISEKELTDNQ MQLLMNAGRT KVIKGFKSKA GKSFEAALVI DKEQKRVTFE
FAARKA
|
|---|
| |