Gene Gbem_4057 details

Gene Information

• Locus tag: Gbem_4057
• ID: 6780920
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: -
• Start bp: 4608940
• End bp: 4610814
• Gene Length: 1875 bp
• Protein Length: 624 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 642770050
• Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
• Protein accession: YP_002140843
• Protein GI: 197120416
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division
• TIGRFAM ID: [TIGR00136] glucose-inhibited division protein A

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGATAGTTT ACGATAAGAC ATATGACGTG ATCGTGGTCG GTGCCGGTCA TGCCGGGTGC 
GAGGCCGCTC TGGCCGCTGC CCGCATGGGG CGTTCCACCC TTATGCTCAC CATCAACCTG 
GACGCCATCG CGCTTATGTC CTGCAACCCG GCCATCGGCG GCCTGGCGAA GGGGCACCTG 
GTTAAGGAGA TCGATGCACT GGGCGGGGAG ATGGGACGGA ACATCGACGC TACCGGAATT 
CAGTTCCGCG TGCTCAACAC CAAGAAGGGC CCAGCGGTGC GCGCCTCCCG CGCACAGGCC 
GACAAGCAGT TGTACCGCCT GCGCATGAAG CATGTCATGG AGCAGCAGGA TAACCTGGAT 
CTGAAGCAGG TTGAGGTCAC GGACTTGTAC CTGGAAGACG GGTCCGTTGC AGGGGTGGAC 
ACCAAGGGCG GGGTGAGGTA CCTAAGCAGG ACCGTTGTTC TCACCACCGG TACCTTCATG 
CGCGGGCTTA TCCATATCGG TCTTGTCCAT TACCCGGGCG GCAGGGCAGG GGACCTTCCC 
TCCATCGGCC TTTCGGACGG ACTGAAGGAC GTAGGCTTCG AGGTGGGAAG GTTGAAGACC 
GGCACTCCCG CACGCCTGGA CGGCAGGACC ATCGACTTCG AAAGGCTTGA AGCGCAGCAC 
GGCGACGAGA ACCCGATCCC GTTTTCTTTC TCCACCGAGA GGATCGAGCA GCAGCAGGTT 
CCCTGCCACA TCGCTTACAC GAATCCAAAG TCGCACGACA TCATCCGCTC CGGACTGGAC 
CGCTCGCCGC TTTACGCCGG TATTATCGAG GGTATCGGCC CCCGGTACTG CCCCTCCATC 
GAAGACAAGG TGGTGCGCTT CCCCGAGAAG GACCGGCACC AGACTTTCAT CGAACCGGAA 
GGGCGCGAGA CGGTAGAGGT GTATCCGAGC GGGATGTCGA CCTCGCTTCC CATCGACATT 
CAGTGGGCCT TCTACCGCAG CATCGAAGGA CTGGAGCGGG TGGAGATCAT GCGCCCGGCC 
TACGCGATCG AGTACGACTA CGTCAACCCG ATCCAGCTGC ACGCCTCTCT GGAGACGAAG 
CTGGTCCGCA ACCTGTACAA CGCGGGGCAG ATCAACGGCA CCTCGGGGTA CGAGGAAGCG 
GCTGCCCAGG GTCTTATGGC AGGGATCAAC GCGGCGCTCA GGGTGCAGGG GAAGGAACCG 
CTCGTACTGG GGAGGAGCGA GGCGTACATA GGGGTCATGA TAGACGACCT GGTGACGCTT 
GGCACCAAGG AGCCGTATCG CATGTTCACC TCGCGCGCCG AGTACCGGCT GCTGCTGCGC 
GAGGACAACG CGGATCTCCG TCTGCGGGAG AAGGGGCACG ACATCGGGCT GGTTCCCGAG 
AGCCTGTACC ACTCCTTCCT GGCCAAGAAG GAACTGATCG ATTCGGAGCT GGATCGGCTT 
TCCAGGGAGA GATTGACGCC GTCGGCAGCA GGCGAGGAGC TTCTGCAGGA GTGGGATCTG 
GTCGGGATTC AGAATGCCAT CAGCTACGAG CAGCTGCTGC GCCGCCCCGA TTTCACCTGC 
AGCGACCTCT CCAGGATTTA CCCGGAGATC ATGGAGCTGC CGGAAACGGT GCGCGAACAG 
CTGGAGATCC AGATCAAGTA CAAGGGATAC ATTGAGCGCC AGCTGGAGCA GGTAGCGCGC 
GCGGCGAGAC TGGAGAGCAC CACCATTCCG GCCGACATGG ACTACAGCAC CGTTCCGAGC 
CTCTCTGCCG AGGTGCGCGA GAAGCTGGTC CGGTTCCGGC CGGACACGCT GGGACAGGCG 
TCACGCATCC CTGGGGTTAC GCCGGCGGGT ATTACCATCC TATCCATCGC GCTCAAAGCG 
AGGTACGGCA GATGA 

 

Protein sequence

MIVYDKTYDV IVVGAGHAGC EAALAAARMG RSTLMLTINL DAIALMSCNP AIGGLAKGHL 
VKEIDALGGE MGRNIDATGI QFRVLNTKKG PAVRASRAQA DKQLYRLRMK HVMEQQDNLD 
LKQVEVTDLY LEDGSVAGVD TKGGVRYLSR TVVLTTGTFM RGLIHIGLVH YPGGRAGDLP 
SIGLSDGLKD VGFEVGRLKT GTPARLDGRT IDFERLEAQH GDENPIPFSF STERIEQQQV 
PCHIAYTNPK SHDIIRSGLD RSPLYAGIIE GIGPRYCPSI EDKVVRFPEK DRHQTFIEPE 
GRETVEVYPS GMSTSLPIDI QWAFYRSIEG LERVEIMRPA YAIEYDYVNP IQLHASLETK 
LVRNLYNAGQ INGTSGYEEA AAQGLMAGIN AALRVQGKEP LVLGRSEAYI GVMIDDLVTL 
GTKEPYRMFT SRAEYRLLLR EDNADLRLRE KGHDIGLVPE SLYHSFLAKK ELIDSELDRL 
SRERLTPSAA GEELLQEWDL VGIQNAISYE QLLRRPDFTC SDLSRIYPEI MELPETVREQ 
LEIQIKYKGY IERQLEQVAR AARLESTTIP ADMDYSTVPS LSAEVREKLV RFRPDTLGQA 
SRIPGVTPAG ITILSIALKA RYGR