| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_4055 |
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| Symbol | |
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| ID | 6780918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 4606484 |
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| End bp | 4607737 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642770048 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_002140841 |
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| Protein GI | 197120414 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATCATT TCCAATATAA AGGTGAAGAG CTGTTCGCAG AAGACGTGGC GATAAAGGAT
ATTGTCGCCG CCGTCGGTAG CCCCGTCTAT ATCTATTCAA AGGCGACGCT GGAAAGACAC
TACAAGGCCA TGGACGATGC CTTCGCCCAG GCACCTCATA CCATCTGCTA CTCCGTCAAG
GCCAACTCCA ACCTCGCCGT GCTGAAGACC TTCATCAACC TGGGGGGCGG GGTCGACATC
GTCTCCGGCG GAGAACTTTA CCGTGCGCTC GCCGCGGGGG TGGACCCGAA GAAAGTGGTT
TACTCCGGGG TGGGCAAAAG GGACGACGAG ATCGCCTACG CGCTGGAGAG CGGAATACTG
ATGTTCAACA TTGAGTCCGA GCAGGAACTG GACCGCATCA GCGATATCGC CGGCCGTATC
GGCAAGAAGG CGGGGATCGC CATCCGCGTG AACCCGGACG TCGACCCTCA AACCCATCCG
TACATCACCA CGGGCCTGAA GAAGGCCAAG TTCGGCATAA ACATTGAGCG CGCCCTGGAG
CAGTACCAGC GCGCCAAGGG ACTCGCCAAC ATAGAGATAC TTGGCATCGA CTGCCACATC
GGCAGCCAGC TCACCAAGGT CTCTCCCTTT GTCGACGCCA TCAAGAAGCT GAAAAGGCTC
CTGGACGGCG TGAGGGGGAT GGGGATCGAC ATCAAATATC TCGATCTCGG TGGCGGCCTC
GGAATCCAGT ACGATGACGA AGCACCACCG CTGCCTGCGG ATTACGGCTC CTCCATCCAG
GAAGAGACCA AGGATCTCGG GCTGCACCTA ATTTTCGAGC CAGGGAGGAA CCTTGTAGGC
AATGCCGGCA TTTTGGTCGG CAAATGCCTC TACACTAAAA AAGGCGAGGA AAAAAACTTC
GTCATCGTGG ATGCCGGCAT GAACGACCTG GCCCGGCCGT CTCTCTACGG CTCCTTCCAC
GGCGTCAGGC CGGTCTTCAG GAACCAGGAC GGCGTGATAG AAGGCGATAT CGTCGGTCCC
ATCTGCGAAT CGGGCGATTT CCTGGTGAAA GAGCGCGAGA TACCGAACTT CCGTCAGGGC
GACCTGATTG CATTCATGTC GGCCGGCGCC TACGGCTTCA CCATGAGCAG CAATTACAAC
AGCCGCCCCC GCGCCGCCGA AGTCATGGTC GACGGGGGCA AGTTCGAAGT GGTGCGCGAC
CGGGAGAAGC TGGAGGACCT GGTCCGGGGC GAGCGCGTTC CGTCCTTTCT TTAA
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| Protein sequence | MHHFQYKGEE LFAEDVAIKD IVAAVGSPVY IYSKATLERH YKAMDDAFAQ APHTICYSVK
ANSNLAVLKT FINLGGGVDI VSGGELYRAL AAGVDPKKVV YSGVGKRDDE IAYALESGIL
MFNIESEQEL DRISDIAGRI GKKAGIAIRV NPDVDPQTHP YITTGLKKAK FGINIERALE
QYQRAKGLAN IEILGIDCHI GSQLTKVSPF VDAIKKLKRL LDGVRGMGID IKYLDLGGGL
GIQYDDEAPP LPADYGSSIQ EETKDLGLHL IFEPGRNLVG NAGILVGKCL YTKKGEEKNF
VIVDAGMNDL ARPSLYGSFH GVRPVFRNQD GVIEGDIVGP ICESGDFLVK EREIPNFRQG
DLIAFMSAGA YGFTMSSNYN SRPRAAEVMV DGGKFEVVRD REKLEDLVRG ERVPSFL
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