| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_4039 |
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| Symbol | |
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| ID | 6780902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 4589161 |
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| End bp | 4590879 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642770032 |
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| Product | histidine kinase |
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| Protein accession | YP_002140825 |
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| Protein GI | 197120398 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCATCA AAGCCCTTTT GCTGCTGGCC GCTCTCACCC TCATTGTCTC GTCGGCGCAC
GCCGGGCCGG CACCCGGCCG CGACCTGAGG GTCATCGTGG TGGGGGGCAA CAGCAACTAC
CCTCCCTACC AGTTCCTGGA TCATAACGGC GAACCTCGCG GCTTCATCGT GGACCTGACC
CGGGCCATCG CCAGGGTAAT GGGGATGCAG ATCGAGATCC GGCTTGACGA TTTCGGCAAG
ATTCTCAAGG AGCTCGACAG CGGCGAGGTC GACATTCTGG AAGGGCTCTC GTACTCGGAT
GCCAGGGCCC GGGAATACGA TTTCTCCACT CCCCACTCCA TCATAGTTCA GGCCATCTTT
GCCCGAAAAG GGACGCCGGC GGTGAAAAGC CTGGAAGAGC TCAAGGGGAA AAAGGTGCTG
GTGCATAGCG GCGGCGGCAT GCACAGCTAC TTGCTGGAAA AGCATTATGA TGCGGACCTG
GTGCTGACCG GCAGCCCGCG GGACACGCTG CAGCAGTTGG CGGCGGGACG CTGCGACTAC
GCGGTAGTGG CCCTGCTCCC CGCCATGTAT ATCATCCGCG AAGAGAAGCT TTCGAACCTG
GTGCCGGTGG CGACCAACGT GGCGCCGCAG CGGTACTACT GCTACGCGGT GAAAAAGGGC
AATGCGGAGT TGGTGGCCCA GATGAACGAA GGGCTCTCGA TTCTCAAGAA AACAGGCGAG
TTCAACGAGA TCTACGACAG GTGGATCGGG GTCCTGGAGC CGCAGCGGAC CTCCTGGCTC
GACGTGGCCA AGTACGCGGC GCTGGTCGTG GTCCCCCTTT CCCTGGTCCT CATGGGAACG
GTGCTCTGGT CCTACTCGCT GCGTCGGCAG GTGGCGCAGC GCACCGAGTC GCTCTCCAGC
GCCTTGGCCG AACTGCAGAG AAACCAGCAG CAGCTGGTGC AGGCGGACAA GATGGCTGCG
CTGGGCATAC TGGTCTCCGG GGTGGCTCAC GAGATCAACA ACCCGACCGG AATCATCCTG
ATGAACATGC CCACTCTGAA GAAGATTTTC CGCGATGCCG AGCTGATCTT CGACCGTTAC
CAGGAGGAAG AGGGGGAGCT GACCCTGGGG GGGATCAGGT ACCAGAGGGT GCGGCAAGAA
GTGCCGCTGA TGCTGGACGA GATGCAGGAT GGCGCCGAGC GGATCAAGAA GACCGTCGAG
GATCTGAAGA ACTTCGCCCG CAAGGACGAC GAAGCCCGAA AGGAGCTGCT GGATTTCAAC
CAGGTGGTGC AGACGGCGGT ACGCCTGGTG GACGTCGCCA CCCGCAAGTT CACCAACGAT
TTCAGTGTCC TTTATGCCGA AGCGTTGCCT GCCGTGTTAG GCAACGAACA GAGGCTGGAG
CAGGTGGTGG TGAACCTGGT CATGAACGCG GGGCAGGCCC TTCCCGACCC CAGCCGCGCC
ATCGCCCTTC AGACCAGGTA CGACGCGGGG AGCGGCAGGG TGATGCTCAC GGTCCGCGAC
CAGGGGAGCG GGATCTCGCC GGAGCACCTG AAGCACCTCA CCGACCCTTT CTTCACCACC
AAGCGCGAGA GCGGGGGGAC CGGGCTGGGG CTCTCCATCT CCGCCAACAT AATCAAGGAC
CACGGCGGCG AAATCGCCTT CGATTCGAGG CTCGGCGAGG GGACTACGGT CACCCTTTCC
CTGCCGGCTG CCGTGGCAGG GAGCAAAAAT GGACAGTGA
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| Protein sequence | MSIKALLLLA ALTLIVSSAH AGPAPGRDLR VIVVGGNSNY PPYQFLDHNG EPRGFIVDLT
RAIARVMGMQ IEIRLDDFGK ILKELDSGEV DILEGLSYSD ARAREYDFST PHSIIVQAIF
ARKGTPAVKS LEELKGKKVL VHSGGGMHSY LLEKHYDADL VLTGSPRDTL QQLAAGRCDY
AVVALLPAMY IIREEKLSNL VPVATNVAPQ RYYCYAVKKG NAELVAQMNE GLSILKKTGE
FNEIYDRWIG VLEPQRTSWL DVAKYAALVV VPLSLVLMGT VLWSYSLRRQ VAQRTESLSS
ALAELQRNQQ QLVQADKMAA LGILVSGVAH EINNPTGIIL MNMPTLKKIF RDAELIFDRY
QEEEGELTLG GIRYQRVRQE VPLMLDEMQD GAERIKKTVE DLKNFARKDD EARKELLDFN
QVVQTAVRLV DVATRKFTND FSVLYAEALP AVLGNEQRLE QVVVNLVMNA GQALPDPSRA
IALQTRYDAG SGRVMLTVRD QGSGISPEHL KHLTDPFFTT KRESGGTGLG LSISANIIKD
HGGEIAFDSR LGEGTTVTLS LPAAVAGSKN GQ
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