Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_4039 |
Symbol | |
ID | 6780902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 4589161 |
End bp | 4590879 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642770032 |
Product | histidine kinase |
Protein accession | YP_002140825 |
Protein GI | 197120398 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCATCA AAGCCCTTTT GCTGCTGGCC GCTCTCACCC TCATTGTCTC GTCGGCGCAC GCCGGGCCGG CACCCGGCCG CGACCTGAGG GTCATCGTGG TGGGGGGCAA CAGCAACTAC CCTCCCTACC AGTTCCTGGA TCATAACGGC GAACCTCGCG GCTTCATCGT GGACCTGACC CGGGCCATCG CCAGGGTAAT GGGGATGCAG ATCGAGATCC GGCTTGACGA TTTCGGCAAG ATTCTCAAGG AGCTCGACAG CGGCGAGGTC GACATTCTGG AAGGGCTCTC GTACTCGGAT GCCAGGGCCC GGGAATACGA TTTCTCCACT CCCCACTCCA TCATAGTTCA GGCCATCTTT GCCCGAAAAG GGACGCCGGC GGTGAAAAGC CTGGAAGAGC TCAAGGGGAA AAAGGTGCTG GTGCATAGCG GCGGCGGCAT GCACAGCTAC TTGCTGGAAA AGCATTATGA TGCGGACCTG GTGCTGACCG GCAGCCCGCG GGACACGCTG CAGCAGTTGG CGGCGGGACG CTGCGACTAC GCGGTAGTGG CCCTGCTCCC CGCCATGTAT ATCATCCGCG AAGAGAAGCT TTCGAACCTG GTGCCGGTGG CGACCAACGT GGCGCCGCAG CGGTACTACT GCTACGCGGT GAAAAAGGGC AATGCGGAGT TGGTGGCCCA GATGAACGAA GGGCTCTCGA TTCTCAAGAA AACAGGCGAG TTCAACGAGA TCTACGACAG GTGGATCGGG GTCCTGGAGC CGCAGCGGAC CTCCTGGCTC GACGTGGCCA AGTACGCGGC GCTGGTCGTG GTCCCCCTTT CCCTGGTCCT CATGGGAACG GTGCTCTGGT CCTACTCGCT GCGTCGGCAG GTGGCGCAGC GCACCGAGTC GCTCTCCAGC GCCTTGGCCG AACTGCAGAG AAACCAGCAG CAGCTGGTGC AGGCGGACAA GATGGCTGCG CTGGGCATAC TGGTCTCCGG GGTGGCTCAC GAGATCAACA ACCCGACCGG AATCATCCTG ATGAACATGC CCACTCTGAA GAAGATTTTC CGCGATGCCG AGCTGATCTT CGACCGTTAC CAGGAGGAAG AGGGGGAGCT GACCCTGGGG GGGATCAGGT ACCAGAGGGT GCGGCAAGAA GTGCCGCTGA TGCTGGACGA GATGCAGGAT GGCGCCGAGC GGATCAAGAA GACCGTCGAG GATCTGAAGA ACTTCGCCCG CAAGGACGAC GAAGCCCGAA AGGAGCTGCT GGATTTCAAC CAGGTGGTGC AGACGGCGGT ACGCCTGGTG GACGTCGCCA CCCGCAAGTT CACCAACGAT TTCAGTGTCC TTTATGCCGA AGCGTTGCCT GCCGTGTTAG GCAACGAACA GAGGCTGGAG CAGGTGGTGG TGAACCTGGT CATGAACGCG GGGCAGGCCC TTCCCGACCC CAGCCGCGCC ATCGCCCTTC AGACCAGGTA CGACGCGGGG AGCGGCAGGG TGATGCTCAC GGTCCGCGAC CAGGGGAGCG GGATCTCGCC GGAGCACCTG AAGCACCTCA CCGACCCTTT CTTCACCACC AAGCGCGAGA GCGGGGGGAC CGGGCTGGGG CTCTCCATCT CCGCCAACAT AATCAAGGAC CACGGCGGCG AAATCGCCTT CGATTCGAGG CTCGGCGAGG GGACTACGGT CACCCTTTCC CTGCCGGCTG CCGTGGCAGG GAGCAAAAAT GGACAGTGA
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Protein sequence | MSIKALLLLA ALTLIVSSAH AGPAPGRDLR VIVVGGNSNY PPYQFLDHNG EPRGFIVDLT RAIARVMGMQ IEIRLDDFGK ILKELDSGEV DILEGLSYSD ARAREYDFST PHSIIVQAIF ARKGTPAVKS LEELKGKKVL VHSGGGMHSY LLEKHYDADL VLTGSPRDTL QQLAAGRCDY AVVALLPAMY IIREEKLSNL VPVATNVAPQ RYYCYAVKKG NAELVAQMNE GLSILKKTGE FNEIYDRWIG VLEPQRTSWL DVAKYAALVV VPLSLVLMGT VLWSYSLRRQ VAQRTESLSS ALAELQRNQQ QLVQADKMAA LGILVSGVAH EINNPTGIIL MNMPTLKKIF RDAELIFDRY QEEEGELTLG GIRYQRVRQE VPLMLDEMQD GAERIKKTVE DLKNFARKDD EARKELLDFN QVVQTAVRLV DVATRKFTND FSVLYAEALP AVLGNEQRLE QVVVNLVMNA GQALPDPSRA IALQTRYDAG SGRVMLTVRD QGSGISPEHL KHLTDPFFTT KRESGGTGLG LSISANIIKD HGGEIAFDSR LGEGTTVTLS LPAAVAGSKN GQ
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