| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_4020 |
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| Symbol | |
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| ID | 6780883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 4563782 |
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| End bp | 4565974 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642770013 |
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| Product | dTDP-4-dehydrorhamnose reductase |
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| Protein accession | YP_002140806 |
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| Protein GI | 197120379 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase
[COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase |
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| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAATG ACAGGCATAA AGAGAGAGTC CCCGAGCTGT GGGGGGGGAT GGAATGCACC
CTGAACCGCG TGGGGAAGCA CTTCCACAGC CAGCTCGCCC TGAACGGCCA CCTGAGCCGC
CCGAAGGATC TCGAACTCTT CGCCGGGCTC GGCATCCGGA CGCTGCGCTA CCCCGTGCTC
TGGGAGATGG TAGCGCCGCA ACGCCTCGAT GCCCCGGACT GGCGCTGGAC CGATGAGAGG
TTGAACCGGT TGCTGGAGCT CGGCCTTGAG CCCGTCGCCG GATTGCTGCA CCACGGCAGC
GGCCCCGCCT ACACCAGCCT CGTCGATCCA GATTTCCCCG CCCTATTGGC CCGCTACGCC
CGCCTGGTCG CACGGCGCTA CCCCTGGATC AGGTACTTCA CCCCCGTCAA CGAACCCCTC
ACCACCGCCC GCTTCAGCGG CCTCTACGGC CACTGGTACC CCCACGGCAC CGACGACCGC
ACCTTCGTCC GCACCTTGCT GTCGCAGTGC CGCGGCATAG TGGAGGCGAT GCGGGGCATC
CGCGAAGTGA CGCCAGAGGC AAAGCTGGTG ATGGCCGAGG ACATGGGGAA GACCTTCTCC
ACGGATCTAC TCCGCTACCA GGCCGACTAC GAGAACCACC GGCGCTGGCT GAGCCTCGAC
CTTTTGGCGG GGAAGGTGGA TCGCTGCCAT CCGCTACGCC TGTGGCTGGA GCAAAACGGG
ACCGACGATG CGGAGTTCGA CTACTTCCTG CAGAGCGGCA TGGCGCCGGA CGTGGTCGGG
CTCAACTACT ACTTGACCAG CGACCGCTTC CTCGACCACC GGCTGGACCG CTACCCCGAG
TGGACCCACG GCGGGAACCA CCAGCACCGC TACGCGGACG TCGAGGCGGT GCGAGCCTGC
CCGGAAGGGA TACTGGGGCA CGAAGAGGTG CTCCGCAGCG CCTGGCAGCG CTACGCAAAG
GAAGTGGCCC TCACCGAGGT GCACCTGGGT TCCACCCGCG AGGAGCAGTT ACGCTGGTTC
CACGAGGCGT GGCAAGCGGG CGTGAAGCTT TGCCGCGAAG GGGTTCCGGT AAGAGCGGTG
ACCGCCTGGT CGCTTTTGGG CTCCTTCGAC TGGTGCGGCC TCTTCACCAG CATCACCGGC
TCTTACGAGC CGGGAGTTTT CGACATCAGG GGGCCTTCCC CGCGCCCCAC GCTCCTTGCC
GGGGGGCTGC GCCAGATCGT GCGCGAGGGG GAGTTGAGCC ATCCAACGGT GAGAAGCCCA
GGCTGGTGGC GCAGGCCGGA CCGGTTTCTT CCCGGCCTGA ACCCCGACCT CCCCTCCACG
GGGGATGAGT GTGCAGAGGA GCGCGGGCGA ATCCTCATCG TCGGTAAGAC CGGGACCTTG
GGGCAGTCCT TCTCCCGGCT CTGCCGGCAT CGCGGCATCC CCTGCCACCT CCTCTCCCGC
GGCGAAATCG ATATCGCCTC TGCGGCCTCG GTCGCGACGG CCTTCGACCG CTACGAACCC
TGGGCGGTGG TCAACGGCGC GGGCTTCGTC CGGATCGACG ACGCCGAGGG GGACGCCAGC
ACCTGCTTCA GGGAAAACAC CGTGGGGCCC GCGGTGCTCG CCGCCGAATG CGCCCGGCGC
GGCGTGCCGC TGATGACCTT CTCCTCCGAC ATGGTCTTCA ACGGCAGCAA GCGGACCGCT
TACCAGGAGC GGGATCCGGT ATCGCCAATC AACATCTACG GGCAGAGCAA GGCCGAGGCG
GAACGCCAGG TGCTTAAGCT ATATCCAGGG GCACTGGTGT TGCGCACCAG CGCATTCTTC
GGCCCCTGGG ACCGGTACAA CTTCGTCACC GTCACTTTGC GCCGGCTCGC GGCCGGGGAA
ACTGTCGAAG CCGCCTCCGA CCTGGTGGTC TCCCCCACTT ACATCCCGGA CCTGGTCCAT
GCCGGGCTCG ACCTGCTCCT GGACGGCGAG AGCGGCATCT GGCACTTAAG CAACGCCGGC
GCCGTGAGCT GGGCCGAGCT CGCCCGCTGC TGCGCCAAAA TGGCGGGATT GGATTCCTCC
CGCGTCATCC CGCGCCCCGC GGCCTCCCTC GGCTACCTCG CGCCACGCCC CCCCTTCTCG
GTCCTGGGAA GCGAGCGCGG CGTGGTACTG CCGGAGCTGG AAAACGCATT GAGCCGATAC
TTCTTCGACA CGGTCCCACC CGAAAACGAG TGA
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| Protein sequence | MSNDRHKERV PELWGGMECT LNRVGKHFHS QLALNGHLSR PKDLELFAGL GIRTLRYPVL
WEMVAPQRLD APDWRWTDER LNRLLELGLE PVAGLLHHGS GPAYTSLVDP DFPALLARYA
RLVARRYPWI RYFTPVNEPL TTARFSGLYG HWYPHGTDDR TFVRTLLSQC RGIVEAMRGI
REVTPEAKLV MAEDMGKTFS TDLLRYQADY ENHRRWLSLD LLAGKVDRCH PLRLWLEQNG
TDDAEFDYFL QSGMAPDVVG LNYYLTSDRF LDHRLDRYPE WTHGGNHQHR YADVEAVRAC
PEGILGHEEV LRSAWQRYAK EVALTEVHLG STREEQLRWF HEAWQAGVKL CREGVPVRAV
TAWSLLGSFD WCGLFTSITG SYEPGVFDIR GPSPRPTLLA GGLRQIVREG ELSHPTVRSP
GWWRRPDRFL PGLNPDLPST GDECAEERGR ILIVGKTGTL GQSFSRLCRH RGIPCHLLSR
GEIDIASAAS VATAFDRYEP WAVVNGAGFV RIDDAEGDAS TCFRENTVGP AVLAAECARR
GVPLMTFSSD MVFNGSKRTA YQERDPVSPI NIYGQSKAEA ERQVLKLYPG ALVLRTSAFF
GPWDRYNFVT VTLRRLAAGE TVEAASDLVV SPTYIPDLVH AGLDLLLDGE SGIWHLSNAG
AVSWAELARC CAKMAGLDSS RVIPRPAASL GYLAPRPPFS VLGSERGVVL PELENALSRY
FFDTVPPENE
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