| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_4004 |
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| Symbol | |
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| ID | 6780868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 4543050 |
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| End bp | 4547462 |
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| Gene Length | 4413 bp |
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| Protein Length | 1470 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642769999 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_002140792 |
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| Protein GI | 197120365 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport
[V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump
[COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium)
[TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCTTT CCGACCTGTC CATAAAACGC CCCGTGTTCG CGGCGGTGCT GATGCTCGCC
CTGGTTACCC TGGGGCTTTT CTCCTACCGC AGGCTTTCCG TCGAGATGTT CCCGAGCGTG
GAGATCCCAG TTATCTCCGT CGTCACCAAG TTCCCCGGCG CCTCCCCCGA GAGCATCGAG
CGCGAGGTCT CCAAGAAGAT CGAGGAGGCG GTGAACCAGA TCGCCGGGGT CAAGCACGTG
ATGTCCTACT CCCGGGAGGG GGTCTCCACG GTGGTGGTGG AGTTCAGGCT CGAAGAGAAG
ATCAACGAGG CCTCCCAGGA GGCGCGGGCG AAGATCGCCG GCATCCGGGG CAATCTCCCC
ACCGGCATCG AGGATCCCAT CATCCAGAAG CTCGACTTCA ACGCGCTTCC GGTGGTCTCC
TTGGCGGTTA AGGGGAGGGG GCTCGACACC AAGGAGCTGA CCACCCTGGT CGACAAGCAG
ATCAAGCGTC GCCTGGAGAA CGTTTCCGGG GTCGGCAAGG TCGACGTGGT CGGCTCCGCC
AAGCGCGAGG TGACGGTCAC CATCGACCCG GTCCGCCTGG AGGCGCTAGG GCTCGGGGTC
GACGCGGTGG TGGCGGGGCT GAAAAGCGAG AACGTCAACA CTCCGCTGGG TCGCCTGACC
CACGGGGGGA ACGAGTACCC GATCCGCATC TCCGGAAAGC CGGGGCAGGT GGAAGGGTTC
CGCAACATGG TGATCGCGCA GCGGGGCGGC CGGGGCATCA CCTTGTCCGA GGTGGCCGAG
GTCACCGACG GCGCCAAGGA GCAGCGCTCG CTCGCCCTCA TCAACGGGGA GCCGGCGGTG
GCGCTCGACG TCTTGAAGCA GTCCGGCGCC AACATGGTCG AGGTGGTCGA CGGGGTCAAA
AAGAGCGTGG AGAAGCTCAG GAAGGAGCTT CCCCCCGGGG TCGAAGTGAC CGTCGTGCGC
GACGCCTCCA TCCCCACCCG CGAGTCGCTG GCCGACGTGA AGGAGACCAT GCTGATTGGC
GGGCTCTTGA CCGTCATCAT CGTCTTTTGC TTCATCAACT CCTGGCGCTC GACGGTGATC
ACCGGGCTTA CCCTCCCCAT CTCGGTCGTC TCCTCGTTCA TCGTCATGAA TGCCATGGGG
ATGACCCTGA ACATCATGAC GATGATGGCG CTCTCGCTGG CCATTGGCCT TTTGATCGAC
GACGCCATCG TGGTGCGGGA GAACATCGTG CGCCACCTGG AGCACGGCGA GGACCACCTG
ACCGCCGCCC GGATCGGCAC CTCCGAGATC GGCCTCGCGG TATTCGCCAC CTCCATGTCC
ATCGTGGCGG TCTTCGTCCC GGTAGCCTTC ATGCGCGGCA TCGTCGGGCG CTTCTTCTTC
CAGTTCGGGA TGACCGTCGC CTTCGCGGTG CTGGTTTCCC TCTTCGTCTC CTTTACCCTC
GACCCCATGC TCTCCTCGCG CTGGCACGAC CCTGCCATCG AGCTCAAGGG AAGGCGCAAG
GGGATAGCCA GGCTCCTGGA CCGGTTCAAC GACCGCTTCG ACGCCTGGGC CGACTCCTAC
CGCAAGGCCA TCTCCTGGGC TCTCAACCAT CGCAAAACCG TGCTGGCAGC GGCCTTTCTC
TCCTTTGCGG CCGGCATCGC CATCTTCGGG ACCCTGGAAT CGTCCTTCAT GACCAACGAC
GACAAGGGTG AGTTTCAGGT GGTGTTCAAG ACCGCCCCCG ACGCGAGCAT AGCCGAGAGC
ACCGACCGGT TGAAGGCAGT ACTCGCCGTG ATCAAGGGGG TCCCCGAGGT GGAGCACACC
TACGCCTCCA TCGGGGCGGG GGACAGCGGC ACCGTCCAGT CCGGGGCGCT CTACGTGAAG
CTCAAGGAGA AGGCGCACCG AAAAAGGAGC CAGGAAGAGG TGCAGCAGGC ATTCCGCGAG
AAGCTGAAGG CGATTCCCGG GATCACCACA TCCATCGAGC GGGTGGGGGA CGTGGGCGGA
GCCCAGAAGC CGCTCCAGGT GAACCTCAAG GGGGAGGATA TCCCGACCCT CAAGCGCTAC
GCCGCCCAGC TTAAGCAGGA GATCTACAAG ATCCCCGGGG TCGTCGACCT GGAGGTGACC
CTGGATCACG ACATCCCCGA GTACCGGATG ACCGTGGACC GCGCCCGCGC CCAGGACGCC
GGGGTCAACA CCAACGACAT CGCCTCCACC GTTTCGCGCC TGGTGGGGGG GGAGGCCGTC
ACCACCTACG AGGATGAGGA CGGCGACGCG GTCGACCTGA GGGTGCGCCT CCCCGAAGCG
CTGCGCCGCG ACCCCGGCCA GGTGCGCGAC CTGAAGCTCG CCGTGGCCAA GGGGGACGAG
ACCGCCCTGG TGCCGCTGGC GAACCTGGTG AGCTACGAGG TCAGCAACAC CCCCTCCGAG
ATCAACCGCC GCGACCTTTC CCGCCTGGTG ACCATCAGCG CGAACCTGGA CGGGCTCCCC
ATCGGCACTG CGGTGGAGAA GGTCAAGGAG GCCGCGGCGC GGGTCCCCAT GCAGCCCGGG
TACAGCGTCG GCTTCTCCGG CGAGGCCGAG GACATGGCGG AGTCCTTCGG TTACATGGCC
GAATCGCTCA TCATCGCCAT CATCTTCGTC TACCTGATCC TCGCGGCCCA GTTCGAGTCG
TTCCTGGAGC CTTTGGCCAT CATGCTTTCG CTGCCGCTCT CAGTCGTAGG GATGGCGGGG
ATGCTGAAGC TCACCGGGGA CACGGTCAAC ATCATGTCGC TCATAGGCCT CATCATGCTG
ATGGGGTTAG TCACCAAGAA CGCCATACTC CTCGTCGATT ACGCGAAGGT GCTGCAGGGG
AGGGGGATGG ACCGATTCCA GGCGGTGGTG GAGGCGGGGA GGACGAGGCT TAGGCCGATC
GTCATGACCA CCCTTGCCAT GATCTTCGGG ATGCTGCCGC TCTTCTTCGC GCTGGGAAGC
GGCGCCGAGA TGAGGGCGCC CATGGCGCGC GCCGTCGTCG GGGGGCTGTT GACCTCGACC
CTTCTGACCC TTTTGGTGGT GCCGGTCATG TACACGGTGC TGGACGACCT GGAGGAGTGG
CTCAGGCGGA AATGGAAGGG GAAGAAGGCG CGCGGCGCGG GACAGGCGGC GGTGCTTCTC
CTCGGCCTCT CGCTTACCCT GGCGCTTACC CCGGGGCTGT GCCTTGCGGG GGAGGCGCGG
ACCCTCACCC TGGACGACGC CCTTTCCATC GCCATGGAGC AGAACCGGGA CATCCAGAAG
GCGCGCGCCT ACGCGCAGCT GGTACAGGGG AAATACCTGG AGGAGCGCGC CGCCGCTCTC
CCCTCGCTTG CGCTGAACGC CTCCGCCGAC TACGTGAGAG ACAACAGCCA GAGCGCCTTC
ACCGGGGGGA TCTCGTCCTC CCGGCAGCGC CTGGCCGATC TCCGGCTTAC CCAGACCCTC
TTCAGCTGGG GTAAGATCGG GGCCGCCATC CGCGGAGCCA AGGAAGGGAT GAAGACCGCC
GAGGACCAGC TCCGCCTCTT CCAGCAGGCG GCCCGCCGGG ACGTCACCGT CTCCTTTTAC
GACGTGCTTT TGGCCAAAGA GCTGAGGGCG CTCGCCCTTT CCAACCTGCA GCAGAAGGAG
CGTCACCTGG CAGAGGCGGT AAAGAGGCTG GCGGCAGGCG TCGCCACCGA CTACGATGTC
CTCGCAGCCA GAGTCGGGGT CGACAACGCA CGTCCCGAGC TGATCCGCAG GGAGAACGCC
ATCAAGACCG CCAAGGAGCG CCTGAGGCTG GTGCTGGCGC TGGAGCCGGG GGAGCTGGAA
GTGACAGGCG TGCTGCAGGC TGTTCCGGTC CCGATCCCGG CCTTCGAAGA ATCCCTGACC
CTTGCCCGGC GGATGCGTCC GGAGTTGTCC GATCTCAAGC ACCGGGTGGG GATTTCGCGG
GAACTGGTCG AGATAGCCGC GGCCGAGAAC AAGCCCCAGC TCGACCTGCG GGGGGGCTTC
GGGTACCACC AGCTGGAAGC GGCGGGAAGA GACTGGCAGG GTACTGCCTA CGACGTCGGC
CTGTTCCTTA CCTTTCCCTT CTTCGACGGC TTTAAGACCA AGGGGAAAGT CGAGCAGGCC
AAGAGCGACC TGAGGACCCG CGAACTGGAG CAGGCCCAGC AGCTCGACGC CGTCTCCCTC
GAAGTGCGGG ACGCCGGCTT CAACGTCACC GAAGCAGCCG AGATACTGAA AGCATTGTCG
GGGACGGTCA CCCAGGCCGA GCGACTTTTG GGCATGGCCG AGCAGGGGTA TCAGCTTGGG
GTGAAAACCA GGCTGGAGGT CGAGGATGCC GAGGCCAACC TGGTGCAGGC AAGGAGCAAC
CTGGCCCAGG CCCGCCGCGA CTACCAAGTC TCCCTGGTCA ACCTGACCTG GGCCACAGGT
GTATTGGGCG AGGTGCCTCT CTCAGCGCTT TGA
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| Protein sequence | MILSDLSIKR PVFAAVLMLA LVTLGLFSYR RLSVEMFPSV EIPVISVVTK FPGASPESIE
REVSKKIEEA VNQIAGVKHV MSYSREGVST VVVEFRLEEK INEASQEARA KIAGIRGNLP
TGIEDPIIQK LDFNALPVVS LAVKGRGLDT KELTTLVDKQ IKRRLENVSG VGKVDVVGSA
KREVTVTIDP VRLEALGLGV DAVVAGLKSE NVNTPLGRLT HGGNEYPIRI SGKPGQVEGF
RNMVIAQRGG RGITLSEVAE VTDGAKEQRS LALINGEPAV ALDVLKQSGA NMVEVVDGVK
KSVEKLRKEL PPGVEVTVVR DASIPTRESL ADVKETMLIG GLLTVIIVFC FINSWRSTVI
TGLTLPISVV SSFIVMNAMG MTLNIMTMMA LSLAIGLLID DAIVVRENIV RHLEHGEDHL
TAARIGTSEI GLAVFATSMS IVAVFVPVAF MRGIVGRFFF QFGMTVAFAV LVSLFVSFTL
DPMLSSRWHD PAIELKGRRK GIARLLDRFN DRFDAWADSY RKAISWALNH RKTVLAAAFL
SFAAGIAIFG TLESSFMTND DKGEFQVVFK TAPDASIAES TDRLKAVLAV IKGVPEVEHT
YASIGAGDSG TVQSGALYVK LKEKAHRKRS QEEVQQAFRE KLKAIPGITT SIERVGDVGG
AQKPLQVNLK GEDIPTLKRY AAQLKQEIYK IPGVVDLEVT LDHDIPEYRM TVDRARAQDA
GVNTNDIAST VSRLVGGEAV TTYEDEDGDA VDLRVRLPEA LRRDPGQVRD LKLAVAKGDE
TALVPLANLV SYEVSNTPSE INRRDLSRLV TISANLDGLP IGTAVEKVKE AAARVPMQPG
YSVGFSGEAE DMAESFGYMA ESLIIAIIFV YLILAAQFES FLEPLAIMLS LPLSVVGMAG
MLKLTGDTVN IMSLIGLIML MGLVTKNAIL LVDYAKVLQG RGMDRFQAVV EAGRTRLRPI
VMTTLAMIFG MLPLFFALGS GAEMRAPMAR AVVGGLLTST LLTLLVVPVM YTVLDDLEEW
LRRKWKGKKA RGAGQAAVLL LGLSLTLALT PGLCLAGEAR TLTLDDALSI AMEQNRDIQK
ARAYAQLVQG KYLEERAAAL PSLALNASAD YVRDNSQSAF TGGISSSRQR LADLRLTQTL
FSWGKIGAAI RGAKEGMKTA EDQLRLFQQA ARRDVTVSFY DVLLAKELRA LALSNLQQKE
RHLAEAVKRL AAGVATDYDV LAARVGVDNA RPELIRRENA IKTAKERLRL VLALEPGELE
VTGVLQAVPV PIPAFEESLT LARRMRPELS DLKHRVGISR ELVEIAAAEN KPQLDLRGGF
GYHQLEAAGR DWQGTAYDVG LFLTFPFFDG FKTKGKVEQA KSDLRTRELE QAQQLDAVSL
EVRDAGFNVT EAAEILKALS GTVTQAERLL GMAEQGYQLG VKTRLEVEDA EANLVQARSN
LAQARRDYQV SLVNLTWATG VLGEVPLSAL
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