Gene Gbem_3997 details

Gene Information

• Locus tag: Gbem_3997
• ID: 6780861
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: +
• Start bp: 4534946
• End bp: 4535452
• Gene Length: 507 bp
• Protein Length: 168 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 642769992
• Product: PBS lyase HEAT domain protein repeat-containing protein
• Protein accession: YP_002140785
• Protein GI: 197120358
• COG category: [C] Energy production and conversion
• COG ID: [COG1413] FOG: HEAT repeat

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCGCCTGG CGGCGGCGCG TGCGCTGGAA AAGCTGGAGG CGGCCGAGAG CCTGGAAGAG 
ATCTTCGATC GGCTGAAACG CGGGGATCGC GCCACCAAAG TGGCCGCTAT TTACGCGATG 
GGGCGCATCG GCGGTGCGAA GGTACTGCCG GTCCTCTTTT ACTGCGCGGG AAGAAGCGAG 
GTAGACATCA AGTCCGCTGC GATACGGGTG CTGGGCGAGG TGGAACTCCC GGAGGCGGTG 
CCTGTCCTTT TGGAGAAACT CGACGATCCG GCGCCGGAGG TGCGGGCCTT CGCCATCGAA 
GCGCTCGGCC ACTACCGCGA CCCCGCCCTG GTCCCCCGGC TGCTCCCTTT CCTGAAAGCA 
AACGACGGCA TGCTCGACGC CGAAGCCGCA CTTGCCTTAG GGCGAATCGG CGACGCGTCG 
CTGGCCGAGC CGCTCATGAG GCTGATCCAC TCCCCCCACG AAAAAACCCG CGCTGCAGCG 
GCAACCGCCC TCTCCCTGCT CCCCTGA 

 

Protein sequence

MRLAAARALE KLEAAESLEE IFDRLKRGDR ATKVAAIYAM GRIGGAKVLP VLFYCAGRSE 
VDIKSAAIRV LGEVELPEAV PVLLEKLDDP APEVRAFAIE ALGHYRDPAL VPRLLPFLKA 
NDGMLDAEAA LALGRIGDAS LAEPLMRLIH SPHEKTRAAA ATALSLLP